BLASTX nr result

ID: Dioscorea21_contig00035786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035786
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA44535.1| TPA: hypothetical protein ZEAMMB73_048051 [Zea m...   189   3e-46
dbj|BAK05716.1| predicted protein [Hordeum vulgare subsp. vulgare]    184   7e-45
ref|XP_002892238.1| AAA-type ATPase family protein [Arabidopsis ...   182   2e-44
ref|NP_171966.2| chromosome transmission fidelity protein 18 [Ar...   180   9e-44
ref|XP_003561791.1| PREDICTED: chromosome transmission fidelity ...   180   1e-43

>tpg|DAA44535.1| TPA: hypothetical protein ZEAMMB73_048051 [Zea mays]
          Length = 944

 Score =  189 bits (479), Expect = 3e-46
 Identities = 91/136 (66%), Positives = 114/136 (83%), Gaps = 2/136 (1%)
 Frame = -2

Query: 403 NSIALSALAEYTECDIRSCLNTLQFLNKKKVNLNVLDIGSQVVGRKDVSRSSFDVWKEVF 224
           +SIALSALAEYTECDIRSCLNTLQFLNKK+V LN+  I SQV+G+KD S+S  DVWK+V 
Sbjct: 494 SSIALSALAEYTECDIRSCLNTLQFLNKKRVALNITAIDSQVIGQKDKSKSILDVWKQVL 553

Query: 223 QKRKSKRERK--SLNDGIRHLDSLYTLVANRGDYELTMDGIHENFLQLSYHDPKMQKTAR 50
           QK++ KR  K  SL +  + +D L+TL++NRGDYE+TMDGIHENFL+LSYHDP +QKT +
Sbjct: 554 QKKRLKRAGKAESLFNEDKDIDFLFTLISNRGDYEVTMDGIHENFLRLSYHDPMLQKTVK 613

Query: 49  CLDMLGISDSLLHYIF 2
           CLD+LG+SDSL  Y++
Sbjct: 614 CLDILGVSDSLTQYVY 629


>dbj|BAK05716.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 939

 Score =  184 bits (467), Expect = 7e-45
 Identities = 88/136 (64%), Positives = 112/136 (82%), Gaps = 2/136 (1%)
 Frame = -2

Query: 403 NSIALSALAEYTECDIRSCLNTLQFLNKKKVNLNVLDIGSQVVGRKDVSRSSFDVWKEVF 224
           +SIALSALA+YTECDIRSCLNTLQFLNKK+  LN+    SQVVGRKD+S+S FDVWK+V 
Sbjct: 494 SSIALSALADYTECDIRSCLNTLQFLNKKREALNISGFDSQVVGRKDMSKSIFDVWKQVL 553

Query: 223 QKRKSKRER--KSLNDGIRHLDSLYTLVANRGDYELTMDGIHENFLQLSYHDPKMQKTAR 50
           QK+K KR     S  +G + + SL++L++NRGDY++TMDGIHENFL+LSYHDP + KT +
Sbjct: 554 QKKKLKRAEMADSNVNGDKDIGSLFSLISNRGDYDVTMDGIHENFLKLSYHDPMLHKTVK 613

Query: 49  CLDMLGISDSLLHYIF 2
           CLD+LG+SD L+ Y+F
Sbjct: 614 CLDVLGVSDYLMQYVF 629


>ref|XP_002892238.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338080|gb|EFH68497.1| AAA-type ATPase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 939

 Score =  182 bits (463), Expect = 2e-44
 Identities = 91/134 (67%), Positives = 104/134 (77%), Gaps = 2/134 (1%)
 Frame = -2

Query: 400 SIALSALAEYTECDIRSCLNTLQFLNKKKVNLNVLDIGSQVVGRKDVSRSSFDVWKEVFQ 221
           S ALSALAEYTECDIRSCLNTLQFL KKK  +NV+DIGSQVVGRKD+S+S FD+WKE+F 
Sbjct: 520 SFALSALAEYTECDIRSCLNTLQFLYKKKETINVIDIGSQVVGRKDMSKSLFDIWKEIFT 579

Query: 220 KRKSKRERK--SLNDGIRHLDSLYTLVANRGDYELTMDGIHENFLQLSYHDPKMQKTARC 47
            RK KRER   +   G ++ D L+TLV++RGDY+L  DGIHEN LQL YHDP M KT  C
Sbjct: 580 TRKMKRERSNDASGSGAKNFDFLHTLVSSRGDYDLIFDGIHENILQLHYHDPVMDKTISC 639

Query: 46  LDMLGISDSLLHYI 5
           LD LG SD L  YI
Sbjct: 640 LDCLGTSDLLHRYI 653


>ref|NP_171966.2| chromosome transmission fidelity protein 18 [Arabidopsis thaliana]
           gi|332189616|gb|AEE27737.1| chromosome transmission
           fidelity protein 18 [Arabidopsis thaliana]
          Length = 943

 Score =  180 bits (457), Expect = 9e-44
 Identities = 90/134 (67%), Positives = 104/134 (77%), Gaps = 2/134 (1%)
 Frame = -2

Query: 400 SIALSALAEYTECDIRSCLNTLQFLNKKKVNLNVLDIGSQVVGRKDVSRSSFDVWKEVFQ 221
           S ALSALAEYTECDIRSCLNTLQFL KKK  +NV+DIGSQVVGRKD+S+S FD+WKE+F 
Sbjct: 506 SFALSALAEYTECDIRSCLNTLQFLYKKKETINVIDIGSQVVGRKDMSKSLFDIWKEIFT 565

Query: 220 KRKSKRERK--SLNDGIRHLDSLYTLVANRGDYELTMDGIHENFLQLSYHDPKMQKTARC 47
            RK KRER   +   G ++ D L++LV++RGDY+L  DGIHEN LQL YHDP M KT  C
Sbjct: 566 TRKMKRERSNDASGSGAKNFDFLHSLVSSRGDYDLIFDGIHENILQLHYHDPVMDKTISC 625

Query: 46  LDMLGISDSLLHYI 5
           LD LG SD L  YI
Sbjct: 626 LDGLGTSDLLHRYI 639


>ref|XP_003561791.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
           [Brachypodium distachyon]
          Length = 944

 Score =  180 bits (456), Expect = 1e-43
 Identities = 85/136 (62%), Positives = 110/136 (80%), Gaps = 2/136 (1%)
 Frame = -2

Query: 403 NSIALSALAEYTECDIRSCLNTLQFLNKKKVNLNVLDIGSQVVGRKDVSRSSFDVWKEVF 224
           +SIALSALA+YTECDIRSCLNTLQFLNKK+  LN+    SQV+GRKD+S+S  DVWK+V 
Sbjct: 500 SSIALSALADYTECDIRSCLNTLQFLNKKREALNISGFESQVIGRKDMSKSILDVWKQVL 559

Query: 223 QKRKSKRER--KSLNDGIRHLDSLYTLVANRGDYELTMDGIHENFLQLSYHDPKMQKTAR 50
           QK+K KR     S     + + SL++L++NRGDY++TMDGIHENFL+LSYHDP + KT +
Sbjct: 560 QKKKLKRAEMADSHVSSDKDIGSLFSLISNRGDYDVTMDGIHENFLRLSYHDPMLHKTVK 619

Query: 49  CLDMLGISDSLLHYIF 2
           CLD+LG+SDS++ Y+F
Sbjct: 620 CLDVLGVSDSMMQYVF 635


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