BLASTX nr result

ID: Dioscorea21_contig00035785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035785
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat...   169   2e-40
emb|CBI30291.3| unnamed protein product [Vitis vinifera]              169   2e-40
emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]   169   2e-40
gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Jap...   168   5e-40

>ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  176 bits (445), Expect = 2e-42
 Identities = 80/106 (75%), Positives = 92/106 (86%)
 Frame = +1

Query: 1   MLGRAGRLKEAEEFIGKMPFEPNAYGWCSLLGACRTHGDKALGELAAEKLIKLEPRNSGI 180
           M GRAGRL EAE+FIG+MP +PNAYGWCSLLGACR  G+K LGE+AA+ ++KLEP N+G+
Sbjct: 469 MYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGV 528

Query: 181 HVLLSNIYGKLGQWEDVKAVRKLIRDNRVKKLPGFSWVDVNNKTHV 318
           HV LS IY  LGQWEDVKAVRKL+RDNR+KKLPGFSWVD N KTHV
Sbjct: 529 HVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHV 574


>ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/106 (73%), Positives = 90/106 (84%)
 Frame = +1

Query: 1   MLGRAGRLKEAEEFIGKMPFEPNAYGWCSLLGACRTHGDKALGELAAEKLIKLEPRNSGI 180
           +LGRAGRLKEA+EFI +MPFEPNA+GWCS LGACR HGDK +G+LAAEKL+KLEP+NSG 
Sbjct: 455 LLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGA 514

Query: 181 HVLLSNIYGKLGQWEDVKAVRKLIRDNRVKKLPGFSWVDVNNKTHV 318
            VLLSNIY    QWEDV++VR  +RD  VKKLPG+SWVDV  KTHV
Sbjct: 515 LVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHV 560


>emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/106 (73%), Positives = 90/106 (84%)
 Frame = +1

Query: 1   MLGRAGRLKEAEEFIGKMPFEPNAYGWCSLLGACRTHGDKALGELAAEKLIKLEPRNSGI 180
           +LGRAGRLKEA+EFI +MPFEPNA+GWCS LGACR HGDK +G+LAAEKL+KLEP+NSG 
Sbjct: 390 LLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGA 449

Query: 181 HVLLSNIYGKLGQWEDVKAVRKLIRDNRVKKLPGFSWVDVNNKTHV 318
            VLLSNIY    QWEDV++VR  +RD  VKKLPG+SWVDV  KTHV
Sbjct: 450 LVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHV 495


>emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/106 (73%), Positives = 90/106 (84%)
 Frame = +1

Query: 1   MLGRAGRLKEAEEFIGKMPFEPNAYGWCSLLGACRTHGDKALGELAAEKLIKLEPRNSGI 180
           +LGRAGRLKEA+EFI +MPFEPNA+GWCS LGACR HGDK +G+LAAEKL+KLEP+NSG 
Sbjct: 455 LLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGA 514

Query: 181 HVLLSNIYGKLGQWEDVKAVRKLIRDNRVKKLPGFSWVDVNNKTHV 318
            VLLSNIY    QWEDV++VR  +RD  VKKLPG+SWVDV  KTHV
Sbjct: 515 LVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHV 560


>gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
           gi|31432781|gb|AAP54374.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 698

 Score =  168 bits (425), Expect = 5e-40
 Identities = 78/104 (75%), Positives = 88/104 (84%)
 Frame = +1

Query: 7   GRAGRLKEAEEFIGKMPFEPNAYGWCSLLGACRTHGDKALGELAAEKLIKLEPRNSGIHV 186
           GRAGRL EA +FI +MP +PNAYGWCSLLGACR  G K LGE+AA+ L+KLEP N+GIHV
Sbjct: 474 GRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHV 533

Query: 187 LLSNIYGKLGQWEDVKAVRKLIRDNRVKKLPGFSWVDVNNKTHV 318
            LS IY  LGQWEDVKAVRKL+RD+R+KKLPGFSWVD N KTHV
Sbjct: 534 SLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHV 577


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