BLASTX nr result

ID: Dioscorea21_contig00035778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035778
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523542.1| Endosomal P24A protein precursor, putative [...   173   1e-41
gb|ABK25111.1| unknown [Picea sitchensis]                             169   2e-40
ref|NP_001190420.1| endomembrane family protein 70 [Arabidopsis ...   169   3e-40
ref|NP_198366.2| endomembrane family protein 70 [Arabidopsis tha...   169   3e-40
gb|AAM20600.1| putative protein [Arabidopsis thaliana] gi|221363...   169   3e-40

>ref|XP_002523542.1| Endosomal P24A protein precursor, putative [Ricinus communis]
           gi|223537249|gb|EEF38881.1| Endosomal P24A protein
           precursor, putative [Ricinus communis]
          Length = 657

 Score =  173 bits (438), Expect = 1e-41
 Identities = 78/144 (54%), Positives = 103/144 (71%)
 Frame = -3

Query: 432 LFYVALGFAGGYISAKLYRTINNGRFRGWVLVSLKTSFFFTGIAFVDIIMLNFLLWGSQS 253
           +FY+ LG A GY++ +L+RTI  G  +GWV VS K + FF GIAF+ + +LNFLLWGSQS
Sbjct: 397 IFYMILGIAAGYVAVRLWRTIGCGDHKGWVSVSWKAACFFPGIAFLILTILNFLLWGSQS 456

Query: 252 SGAXXXXXXXXXXXXXSCVSTPLTLVGSYFGARSDLIRYPTKPSQIPRDIPSQNYPSWMW 73
           +GA              C+S PLTL+G YFGA++  I YP + +QIPR+IP+Q YPSW+ 
Sbjct: 457 TGAIPFSLFVILILLWFCISVPLTLIGGYFGAKAPHIEYPVRTNQIPREIPAQKYPSWLL 516

Query: 72  IIGAGAIPFATLFMELFFIMSSFW 1
           ++GAG +PF TLF+ELFFIMSS W
Sbjct: 517 VLGAGTLPFGTLFIELFFIMSSIW 540


>gb|ABK25111.1| unknown [Picea sitchensis]
          Length = 664

 Score =  169 bits (428), Expect = 2e-40
 Identities = 75/143 (52%), Positives = 100/143 (69%)
 Frame = -3

Query: 429 FYVALGFAGGYISAKLYRTINNGRFRGWVLVSLKTSFFFTGIAFVDIIMLNFLLWGSQSS 250
           FY+ LG A GY++ +++RT+  G  RGW  +S + + FF GIAF+ + +LNFLLWGSQS+
Sbjct: 405 FYLVLGIAAGYVAVRMWRTLKGGDHRGWKSISWRVACFFPGIAFLILTVLNFLLWGSQST 464

Query: 249 GAXXXXXXXXXXXXXSCVSTPLTLVGSYFGARSDLIRYPTKPSQIPRDIPSQNYPSWMWI 70
           GA              C+S PLTL+G YFGA++  I YP + +QIPR+IP Q YPSWM +
Sbjct: 465 GAIPISLFIVLLALWFCISVPLTLLGGYFGAKAPHIEYPVRTNQIPREIPPQKYPSWMLV 524

Query: 69  IGAGAIPFATLFMELFFIMSSFW 1
           +GAG +PF TLF+ELFFIMSS W
Sbjct: 525 LGAGTLPFGTLFIELFFIMSSIW 547


>ref|NP_001190420.1| endomembrane family protein 70 [Arabidopsis thaliana]
           gi|10176814|dbj|BAB10022.1| endosomal protein-like
           [Arabidopsis thaliana] gi|332006552|gb|AED93935.1|
           endomembrane family protein 70 [Arabidopsis thaliana]
          Length = 658

 Score =  169 bits (427), Expect = 3e-40
 Identities = 76/143 (53%), Positives = 100/143 (69%)
 Frame = -3

Query: 429 FYVALGFAGGYISAKLYRTINNGRFRGWVLVSLKTSFFFTGIAFVDIIMLNFLLWGSQSS 250
           FY+ LG A GY+S +L+RTI  G  RGW+ V+ K + FF GIAF+ +  LNFLLWGS S+
Sbjct: 399 FYMILGIAAGYVSVRLWRTIGCGEHRGWMSVAWKAACFFPGIAFLILTTLNFLLWGSHST 458

Query: 249 GAXXXXXXXXXXXXXSCVSTPLTLVGSYFGARSDLIRYPTKPSQIPRDIPSQNYPSWMWI 70
           GA              C+S PLTL+G YFGA++  I +P + +QIPR+IP+Q YPSW+ +
Sbjct: 459 GAIPFSLFVILLLLWFCISVPLTLIGGYFGAKAPHIEFPVRTNQIPREIPAQKYPSWLLV 518

Query: 69  IGAGAIPFATLFMELFFIMSSFW 1
           +GAG +PF TLF+ELFFIMSS W
Sbjct: 519 LGAGTLPFGTLFIELFFIMSSIW 541


>ref|NP_198366.2| endomembrane family protein 70 [Arabidopsis thaliana]
           gi|332006551|gb|AED93934.1| endomembrane family protein
           70 [Arabidopsis thaliana]
          Length = 630

 Score =  169 bits (427), Expect = 3e-40
 Identities = 76/143 (53%), Positives = 100/143 (69%)
 Frame = -3

Query: 429 FYVALGFAGGYISAKLYRTINNGRFRGWVLVSLKTSFFFTGIAFVDIIMLNFLLWGSQSS 250
           FY+ LG A GY+S +L+RTI  G  RGW+ V+ K + FF GIAF+ +  LNFLLWGS S+
Sbjct: 371 FYMILGIAAGYVSVRLWRTIGCGEHRGWMSVAWKAACFFPGIAFLILTTLNFLLWGSHST 430

Query: 249 GAXXXXXXXXXXXXXSCVSTPLTLVGSYFGARSDLIRYPTKPSQIPRDIPSQNYPSWMWI 70
           GA              C+S PLTL+G YFGA++  I +P + +QIPR+IP+Q YPSW+ +
Sbjct: 431 GAIPFSLFVILLLLWFCISVPLTLIGGYFGAKAPHIEFPVRTNQIPREIPAQKYPSWLLV 490

Query: 69  IGAGAIPFATLFMELFFIMSSFW 1
           +GAG +PF TLF+ELFFIMSS W
Sbjct: 491 LGAGTLPFGTLFIELFFIMSSIW 513


>gb|AAM20600.1| putative protein [Arabidopsis thaliana] gi|22136376|gb|AAM91266.1|
           putative protein [Arabidopsis thaliana]
          Length = 425

 Score =  169 bits (427), Expect = 3e-40
 Identities = 76/143 (53%), Positives = 100/143 (69%)
 Frame = -3

Query: 429 FYVALGFAGGYISAKLYRTINNGRFRGWVLVSLKTSFFFTGIAFVDIIMLNFLLWGSQSS 250
           FY+ LG A GY+S +L+RTI  G  RGW+ V+ K + FF GIAF+ +  LNFLLWGS S+
Sbjct: 166 FYMILGIAAGYVSVRLWRTIGCGEHRGWMSVAWKAACFFPGIAFLILTTLNFLLWGSHST 225

Query: 249 GAXXXXXXXXXXXXXSCVSTPLTLVGSYFGARSDLIRYPTKPSQIPRDIPSQNYPSWMWI 70
           GA              C+S PLTL+G YFGA++  I +P + +QIPR+IP+Q YPSW+ +
Sbjct: 226 GAIPFSLFVILLLLWFCISVPLTLIGGYFGAKAPHIEFPVRTNQIPREIPAQKYPSWLLV 285

Query: 69  IGAGAIPFATLFMELFFIMSSFW 1
           +GAG +PF TLF+ELFFIMSS W
Sbjct: 286 LGAGTLPFGTLFIELFFIMSSIW 308


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