BLASTX nr result

ID: Dioscorea21_contig00035776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035776
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301364.1| chromatin remodeling complex subunit [Populu...   367   1e-99
ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...   365   6e-99
emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]   365   6e-99
ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com...   364   1e-98
ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [...   355   4e-96

>ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222843090|gb|EEE80637.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2222

 Score =  367 bits (942), Expect = 1e-99
 Identities = 169/223 (75%), Positives = 196/223 (87%)
 Frame = -2

Query: 671  VFDNHKTFHDWFSKPLCKVASSHNSEDEWLETEKKVIIIHRLHQILEPFVLRRRVEDVEG 492
            VFDN K FHDWFSKP  + A  H+ ED+WLETEKKVIIIHRLHQILEPF+LRRRVEDVEG
Sbjct: 1164 VFDNRKAFHDWFSKPFQREAPVHDGEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 1223

Query: 491  ALPPKVSVVVRCRMSAVQSCIYDWIRDSGTIRVYPEEEMRKVQRNPKYNVKKYTNLTNKC 312
            +LPPKVS+V+RCRMSA+QS IYDWI+ +GTIRV PE+E R+VQ+NP Y  K Y  L N+C
Sbjct: 1224 SLPPKVSIVLRCRMSAIQSTIYDWIKSTGTIRVDPEDEKRRVQKNPAYQAKVYRTLNNRC 1283

Query: 311  IELRKVCNHPLLNYPYFNDYSKDFIVRSCGKLWVLDRILMKLKRAGHRVLLFSTMTSLLD 132
            +ELRK CNHPLLNYPYFND SKDF+V+SCGKLWVLDRIL+KL+R GHRVLLFSTMT LLD
Sbjct: 1284 MELRKTCNHPLLNYPYFNDLSKDFLVKSCGKLWVLDRILIKLQRTGHRVLLFSTMTKLLD 1343

Query: 131  IVEECLQWRQLIYARIDGSSSIQDRETAITYFNSPGSDCFIFL 3
            I+EE LQWR+L+Y RIDG++S++DRE+AI  FNSPGSDCFIFL
Sbjct: 1344 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPGSDCFIFL 1386


>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score =  365 bits (936), Expect = 6e-99
 Identities = 165/223 (73%), Positives = 196/223 (87%)
 Frame = -2

Query: 671  VFDNHKTFHDWFSKPLCKVASSHNSEDEWLETEKKVIIIHRLHQILEPFVLRRRVEDVEG 492
            VFDN K FHDWFSKP  K   +HN+ED+WLETEKKVIIIHRLHQILEPF+LRRRVEDVEG
Sbjct: 1191 VFDNRKAFHDWFSKPFQKEGPTHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 1250

Query: 491  ALPPKVSVVVRCRMSAVQSCIYDWIRDSGTIRVYPEEEMRKVQRNPKYNVKKYTNLTNKC 312
            +LPPKVS+V+RC+MSA+Q  IYDWI+ +GT+RV PE+E R+VQ+NP Y  K Y  L N+C
Sbjct: 1251 SLPPKVSIVLRCKMSAIQGAIYDWIKSTGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRC 1310

Query: 311  IELRKVCNHPLLNYPYFNDYSKDFIVRSCGKLWVLDRILMKLKRAGHRVLLFSTMTSLLD 132
            +ELRK CNHPLLNYPYFND+SKDF+VRSCGK+W+LDRIL+KL+R GHRVLLFSTMT LLD
Sbjct: 1311 MELRKACNHPLLNYPYFNDFSKDFLVRSCGKMWILDRILIKLQRTGHRVLLFSTMTKLLD 1370

Query: 131  IVEECLQWRQLIYARIDGSSSIQDRETAITYFNSPGSDCFIFL 3
            I+EE LQWR+L+Y RIDG++S++DRE+AI  FNS GSDCFIFL
Sbjct: 1371 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSAGSDCFIFL 1413


>emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]
          Length = 2238

 Score =  365 bits (936), Expect = 6e-99
 Identities = 165/223 (73%), Positives = 196/223 (87%)
 Frame = -2

Query: 671  VFDNHKTFHDWFSKPLCKVASSHNSEDEWLETEKKVIIIHRLHQILEPFVLRRRVEDVEG 492
            VFDN K FHDWFSKP  K   +HN+ED+WLETEKKVIIIHRLHQILEPF+LRRRVEDVEG
Sbjct: 1166 VFDNRKAFHDWFSKPFQKEGPTHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 1225

Query: 491  ALPPKVSVVVRCRMSAVQSCIYDWIRDSGTIRVYPEEEMRKVQRNPKYNVKKYTNLTNKC 312
            +LPPKVS+V+RC+MSA+Q  IYDWI+ +GT+RV PE+E R+VQ+NP Y  K Y  L N+C
Sbjct: 1226 SLPPKVSIVLRCKMSAIQGAIYDWIKSTGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRC 1285

Query: 311  IELRKVCNHPLLNYPYFNDYSKDFIVRSCGKLWVLDRILMKLKRAGHRVLLFSTMTSLLD 132
            +ELRK CNHPLLNYPYFND+SKDF+VRSCGK+W+LDRIL+KL+R GHRVLLFSTMT LLD
Sbjct: 1286 MELRKACNHPLLNYPYFNDFSKDFLVRSCGKMWILDRILIKLQRTGHRVLLFSTMTKLLD 1345

Query: 131  IVEECLQWRQLIYARIDGSSSIQDRETAITYFNSPGSDCFIFL 3
            I+EE LQWR+L+Y RIDG++S++DRE+AI  FNS GSDCFIFL
Sbjct: 1346 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSAGSDCFIFL 1388


>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
            gi|223549062|gb|EEF50551.1| Chromo domain protein,
            putative [Ricinus communis]
          Length = 2248

 Score =  364 bits (934), Expect = 1e-98
 Identities = 165/223 (73%), Positives = 196/223 (87%)
 Frame = -2

Query: 671  VFDNHKTFHDWFSKPLCKVASSHNSEDEWLETEKKVIIIHRLHQILEPFVLRRRVEDVEG 492
            VFDN K FHDWFSKP  K   +H++ED+WLETEKKVIIIHRLHQILEPF+LRRRVEDVEG
Sbjct: 1185 VFDNRKAFHDWFSKPFQKEGPAHDAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 1244

Query: 491  ALPPKVSVVVRCRMSAVQSCIYDWIRDSGTIRVYPEEEMRKVQRNPKYNVKKYTNLTNKC 312
            +LPPKVS+V+RCRMSA+QS +YDWI+ +GT+RV PE+E R+ Q+NP Y  K Y  L N+C
Sbjct: 1245 SLPPKVSIVLRCRMSAIQSAVYDWIKSTGTLRVDPEDEKRRAQKNPIYQPKVYKTLNNRC 1304

Query: 311  IELRKVCNHPLLNYPYFNDYSKDFIVRSCGKLWVLDRILMKLKRAGHRVLLFSTMTSLLD 132
            +ELRK CNHPLLNYPYFND+SKDF+VRSCGKLW+LDRIL+KL+R GHRVLLFSTMT LLD
Sbjct: 1305 MELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLD 1364

Query: 131  IVEECLQWRQLIYARIDGSSSIQDRETAITYFNSPGSDCFIFL 3
            I+EE LQWR+L+Y RIDG++S++DRE+AI  FNSP SDCFIFL
Sbjct: 1365 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFL 1407


>ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [Cucumis sativus]
          Length = 2247

 Score =  355 bits (911), Expect = 4e-96
 Identities = 162/223 (72%), Positives = 193/223 (86%)
 Frame = -2

Query: 671  VFDNHKTFHDWFSKPLCKVASSHNSEDEWLETEKKVIIIHRLHQILEPFVLRRRVEDVEG 492
            VFDN K FHDWFSKP  K   + N+ED+WLETEKK+IIIHRLHQILEPF+LRRRVEDVEG
Sbjct: 1184 VFDNRKAFHDWFSKPFQKEGPTPNAEDDWLETEKKIIIIHRLHQILEPFMLRRRVEDVEG 1243

Query: 491  ALPPKVSVVVRCRMSAVQSCIYDWIRDSGTIRVYPEEEMRKVQRNPKYNVKKYTNLTNKC 312
            +LPPKVS+V+RCRMSA QS +YDWI+ +GT+RV PE+E  +VQ+NP Y  K Y  L N+C
Sbjct: 1244 SLPPKVSIVLRCRMSAFQSAVYDWIKATGTLRVDPEDEKLRVQKNPNYQPKVYKTLNNRC 1303

Query: 311  IELRKVCNHPLLNYPYFNDYSKDFIVRSCGKLWVLDRILMKLKRAGHRVLLFSTMTSLLD 132
            +ELRK CNHPLLNYPY+ D+SKDF+VRSCGKLW+LDRIL+KL++ GHRVLLFSTMT LLD
Sbjct: 1304 MELRKTCNHPLLNYPYYGDFSKDFLVRSCGKLWILDRILIKLQKTGHRVLLFSTMTKLLD 1363

Query: 131  IVEECLQWRQLIYARIDGSSSIQDRETAITYFNSPGSDCFIFL 3
            I+EE LQWR+LIY RIDG++S++DRE+AI  FNSP SDCFIFL
Sbjct: 1364 ILEEYLQWRRLIYRRIDGTTSLEDRESAIVDFNSPDSDCFIFL 1406


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