BLASTX nr result

ID: Dioscorea21_contig00035774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035774
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group] g...   148   4e-34
gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indi...   148   4e-34
gb|EEE58379.1| hypothetical protein OsJ_09535 [Oryza sativa Japo...   144   7e-33
gb|EEC74578.1| hypothetical protein OsI_10148 [Oryza sativa Indi...   144   7e-33
gb|AAM15783.1|AC104428_4 Putative DNA topoisomerase III [Oryza s...   144   7e-33

>ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
           gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa
           Japonica Group]
          Length = 928

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/93 (76%), Positives = 76/93 (81%)
 Frame = +3

Query: 108 VLNVAEKPSVAKSVAEILSHAXXXXXXXXXXXXYNRIFEFDYSIHGQRCHMLMTSVTGHL 287
           VLNVAEKPSVAKSVAEILS              YNR+FEFDYSI G+ CHML+TSVTGHL
Sbjct: 12  VLNVAEKPSVAKSVAEILSRPSGGMRSREGRSRYNRVFEFDYSIGGRACHMLVTSVTGHL 71

Query: 288 MELEFDDRFRKWHSCDPADLYHAPVRKHVPQDK 386
           MELEFDDRFR+WHSCDPADL+HAPVRK VPQDK
Sbjct: 72  MELEFDDRFRRWHSCDPADLFHAPVRKSVPQDK 104


>gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indica Group]
          Length = 897

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/93 (76%), Positives = 76/93 (81%)
 Frame = +3

Query: 108 VLNVAEKPSVAKSVAEILSHAXXXXXXXXXXXXYNRIFEFDYSIHGQRCHMLMTSVTGHL 287
           VLNVAEKPSVAKSVAEILS              YNR+FEFDYSI G+ CHML+TSVTGHL
Sbjct: 12  VLNVAEKPSVAKSVAEILSRPSGGMRSREGRSRYNRVFEFDYSIGGRACHMLVTSVTGHL 71

Query: 288 MELEFDDRFRKWHSCDPADLYHAPVRKHVPQDK 386
           MELEFDDRFR+WHSCDPADL+HAPVRK VPQDK
Sbjct: 72  MELEFDDRFRRWHSCDPADLFHAPVRKSVPQDK 104


>gb|EEE58379.1| hypothetical protein OsJ_09535 [Oryza sativa Japonica Group]
          Length = 983

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/91 (75%), Positives = 74/91 (81%)
 Frame = +3

Query: 108 VLNVAEKPSVAKSVAEILSHAXXXXXXXXXXXXYNRIFEFDYSIHGQRCHMLMTSVTGHL 287
           VLNVAEKPSVAKSVAEILS              YNR+FEFDYSI G+ CHML+TSVTGHL
Sbjct: 12  VLNVAEKPSVAKSVAEILSRPSGGMRSREGRSRYNRVFEFDYSIGGRACHMLVTSVTGHL 71

Query: 288 MELEFDDRFRKWHSCDPADLYHAPVRKHVPQ 380
           MELEFDDRFR+WHSCDPADL+HAPVRK VPQ
Sbjct: 72  MELEFDDRFRRWHSCDPADLFHAPVRKSVPQ 102


>gb|EEC74578.1| hypothetical protein OsI_10148 [Oryza sativa Indica Group]
          Length = 981

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/91 (75%), Positives = 74/91 (81%)
 Frame = +3

Query: 108 VLNVAEKPSVAKSVAEILSHAXXXXXXXXXXXXYNRIFEFDYSIHGQRCHMLMTSVTGHL 287
           VLNVAEKPSVAKSVAEILS              YNR+FEFDYSI G+ CHML+TSVTGHL
Sbjct: 12  VLNVAEKPSVAKSVAEILSRPSGGMRSREGRSRYNRVFEFDYSIGGRACHMLVTSVTGHL 71

Query: 288 MELEFDDRFRKWHSCDPADLYHAPVRKHVPQ 380
           MELEFDDRFR+WHSCDPADL+HAPVRK VPQ
Sbjct: 72  MELEFDDRFRRWHSCDPADLFHAPVRKSVPQ 102


>gb|AAM15783.1|AC104428_4 Putative DNA topoisomerase III [Oryza sativa Japonica Group]
           gi|108706350|gb|ABF94145.1| DNA topoisomerase family
           protein, expressed [Oryza sativa Japonica Group]
          Length = 912

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/91 (75%), Positives = 74/91 (81%)
 Frame = +3

Query: 108 VLNVAEKPSVAKSVAEILSHAXXXXXXXXXXXXYNRIFEFDYSIHGQRCHMLMTSVTGHL 287
           VLNVAEKPSVAKSVAEILS              YNR+FEFDYSI G+ CHML+TSVTGHL
Sbjct: 12  VLNVAEKPSVAKSVAEILSRPSGGMRSREGRSRYNRVFEFDYSIGGRACHMLVTSVTGHL 71

Query: 288 MELEFDDRFRKWHSCDPADLYHAPVRKHVPQ 380
           MELEFDDRFR+WHSCDPADL+HAPVRK VPQ
Sbjct: 72  MELEFDDRFRRWHSCDPADLFHAPVRKSVPQ 102


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