BLASTX nr result

ID: Dioscorea21_contig00035754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035754
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   186   1e-45
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]   186   2e-45
gb|AAO23078.1| polyprotein [Glycine max]                              182   3e-44
emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]   181   7e-44
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]   180   1e-43

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  186 bits (473), Expect = 1e-45
 Identities = 89/169 (52%), Positives = 116/169 (68%)
 Frame = -1

Query: 509  RLAAVFFWPELRRTVQEYVSKCITCQTIKPFNRAXXXXXXXXXXXGKIWHSISMDFITGL 330
            RLAA  +W  ++ TVQEYV  C TCQ  K    +            +IW  +SMDFI GL
Sbjct: 886  RLAANVYWVGMKNTVQEYVRSCDTCQRQKYLASSPGGLLQPLPVPDRIWEDLSMDFIMGL 945

Query: 329  PPSQGKTVILVVVDRLSKHAHFSALGSIFTAPHVAEIMLRDIIKLHGIPAQIISERDPVF 150
            P S+G   +LVVVDRLSK++HF  L   +TA  +A++ +R++++LHGIP  I+S+RDP+F
Sbjct: 946  PKSKGYEAVLVVVDRLSKYSHFILLKHPYTAKVIADVFIREVVRLHGIPLSIVSDRDPIF 1005

Query: 149  MSSFWQELFRLQGTFLATSSAYHPQTDGQTEVLNRYLEDYLRSFAGDNP 3
            MS+FW+ELF+LQGT L  S AYHP+TDGQTEV+NR LE YLR F  D P
Sbjct: 1006 MSNFWKELFKLQGTKLKMSIAYHPETDGQTEVVNRCLETYLRCFIADQP 1054


>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score =  186 bits (472), Expect = 2e-45
 Identities = 92/169 (54%), Positives = 111/169 (65%)
 Frame = -1

Query: 509 RLAAVFFWPELRRTVQEYVSKCITCQTIKPFNRAXXXXXXXXXXXGKIWHSISMDFITGL 330
           R+A  F+WP + R V EYVS C  CQ  K    +            ++W  I+MDFI GL
Sbjct: 222 RIAQQFYWPSMYRMVNEYVSSCDVCQRAKASTLSPAGLLQPLPIPCQVWDDITMDFIEGL 281

Query: 329 PPSQGKTVILVVVDRLSKHAHFSALGSIFTAPHVAEIMLRDIIKLHGIPAQIISERDPVF 150
           PPSQGK  ILVVVDRLSK AHF AL   F+A  VAE  +  +IKLHG+P+ IIS+RDP+F
Sbjct: 282 PPSQGKNTILVVVDRLSKSAHFLALTHPFSAKMVAEKFVDGVIKLHGMPSSIISDRDPIF 341

Query: 149 MSSFWQELFRLQGTFLATSSAYHPQTDGQTEVLNRYLEDYLRSFAGDNP 3
           +S+FW E F+L GT L  SSAYHPQTDGQTEV+NR +E YLR      P
Sbjct: 342 ISNFWHEFFKLSGTQLKMSSAYHPQTDGQTEVINRCVEQYLRCLVHQQP 390


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  182 bits (461), Expect = 3e-44
 Identities = 87/170 (51%), Positives = 117/170 (68%)
 Frame = -1

Query: 512  ARLAAVFFWPELRRTVQEYVSKCITCQTIKPFNRAXXXXXXXXXXXGKIWHSISMDFITG 333
            ARL A F+WP+++  V+ Y+ KC+ CQ  K  N              ++W  ++MDFITG
Sbjct: 1094 ARLKAQFYWPKMQEDVKAYIQKCLICQQAKSNNTLPAGLLQPLPIPQQVWEDVAMDFITG 1153

Query: 332  LPPSQGKTVILVVVDRLSKHAHFSALGSIFTAPHVAEIMLRDIIKLHGIPAQIISERDPV 153
            LP S G +VI+VV+DRL+K+AHF  L + + +  VAE  +  I+KLHGIP  I+S+RD V
Sbjct: 1154 LPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRV 1213

Query: 152  FMSSFWQELFRLQGTFLATSSAYHPQTDGQTEVLNRYLEDYLRSFAGDNP 3
            F S+FWQ LF+LQGT LA SSAYHPQ+DGQ+EVLN+ LE YLR F  ++P
Sbjct: 1214 FTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRCFTYEHP 1263


>emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]
          Length = 672

 Score =  181 bits (458), Expect = 7e-44
 Identities = 87/169 (51%), Positives = 109/169 (64%)
 Frame = -1

Query: 509 RLAAVFFWPELRRTVQEYVSKCITCQTIKPFNRAXXXXXXXXXXXGKIWHSISMDFITGL 330
           R++AV +W  LR+ V+EYV  C  CQ  KP N+              ++  I+MDFI GL
Sbjct: 206 RISAVIYWKGLRKFVREYVRNCFVCQRFKPENKPYSGLLQPLPVPEGVFTDITMDFIEGL 265

Query: 329 PPSQGKTVILVVVDRLSKHAHFSALGSIFTAPHVAEIMLRDIIKLHGIPAQIISERDPVF 150
           P S GKT I VVVDRL+K+ HF  L   +T   VA++ L  + KLHG+P  I  +RDP+F
Sbjct: 266 PKSNGKTAIFVVVDRLTKYGHFMLLPHPYTTKMVAQVFLDSVYKLHGLPYSITCDRDPIF 325

Query: 149 MSSFWQELFRLQGTFLATSSAYHPQTDGQTEVLNRYLEDYLRSFAGDNP 3
            S FWQE F+LQG  L  S+AYHPQTDGQTEV+NR +E YLR  AGDNP
Sbjct: 326 TSVFWQEFFKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMAGDNP 374


>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
          Length = 1378

 Score =  180 bits (456), Expect = 1e-43
 Identities = 87/169 (51%), Positives = 110/169 (65%)
 Frame = -1

Query: 509  RLAAVFFWPELRRTVQEYVSKCITCQTIKPFNRAXXXXXXXXXXXGKIWHSISMDFITGL 330
            R++AV +W  LR+ V+EYV  C  CQ  KP N+              ++  I+MDFI GL
Sbjct: 1012 RISAVVYWKGLRKFVREYVRNCSVCQRFKPENKPYSGLLQPLPVPEGVFTDITMDFIEGL 1071

Query: 329  PPSQGKTVILVVVDRLSKHAHFSALGSIFTAPHVAEIMLRDIIKLHGIPAQIISERDPVF 150
            P S GKT I VVVDRL+K+ HF  L   +TA  VA++ L  + KLHG+P  I  +RDP+F
Sbjct: 1072 PKSNGKTTIFVVVDRLTKYGHFMLLPHPYTAKMVAQVFLDSVYKLHGLPHSITCDRDPIF 1131

Query: 149  MSSFWQELFRLQGTFLATSSAYHPQTDGQTEVLNRYLEDYLRSFAGDNP 3
             + FWQE F+LQG  L  S+AYHPQTDGQTEV+NR +E YLR  AGDNP
Sbjct: 1132 TNVFWQEFFKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMAGDNP 1180


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