BLASTX nr result

ID: Dioscorea21_contig00035749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035749
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319710.1| vitamin-b12 independent methionine synthase,...   306   3e-81
gb|ABK93849.1| unknown [Populus trichocarpa]                          306   3e-81
ref|XP_003601341.1| Methionine synthase [Medicago truncatula] gi...   303   2e-80
gb|AAL73979.1|AF466201_8 methionine synthase protein [Sorghum bi...   303   2e-80
ref|XP_002325856.1| vitamin-b12 independent methionine synthase,...   303   2e-80

>ref|XP_002319710.1| vitamin-b12 independent methionine synthase,
            5-methyltetrahydropteroyltriglutamate-homocysteine
            [Populus trichocarpa] gi|222858086|gb|EEE95633.1|
            vitamin-b12 independent methionine synthase,
            5-methyltetrahydropteroyltriglutamate-homocysteine
            [Populus trichocarpa]
          Length = 765

 Score =  306 bits (784), Expect = 3e-81
 Identities = 150/158 (94%), Positives = 154/158 (97%)
 Frame = -3

Query: 732  ALREGLPLRKSEQSFYLDWAVHSFRITNCGVKDTTQIHTHMCYSHFNDIIHSIIDMDADV 553
            ALREGLPLRKSEQ+FYLDWAVHSFRITNCGV+DTTQIHTHMCYS+FNDIIHSIIDMDADV
Sbjct: 608  ALREGLPLRKSEQAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 667

Query: 552  ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNIL 373
            ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNIL
Sbjct: 668  ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNIL 727

Query: 372  WVNPDCGLKTRKYPEVKPALTNMVSAAKILRKQLASAK 259
            WVNPDCGLKTRKY EVKPAL NMV AAK+LR QLASAK
Sbjct: 728  WVNPDCGLKTRKYSEVKPALKNMVDAAKLLRTQLASAK 765


>gb|ABK93849.1| unknown [Populus trichocarpa]
          Length = 554

 Score =  306 bits (784), Expect = 3e-81
 Identities = 150/158 (94%), Positives = 154/158 (97%)
 Frame = -3

Query: 732 ALREGLPLRKSEQSFYLDWAVHSFRITNCGVKDTTQIHTHMCYSHFNDIIHSIIDMDADV 553
           ALREGLPLRKSEQ+FYLDWAVHSFRITNCGV+DTTQIHTHMCYS+FNDIIHSIIDMDADV
Sbjct: 397 ALREGLPLRKSEQAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 456

Query: 552 ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNIL 373
           ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNIL
Sbjct: 457 ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNIL 516

Query: 372 WVNPDCGLKTRKYPEVKPALTNMVSAAKILRKQLASAK 259
           WVNPDCGLKTRKY EVKPAL NMV AAK+LR QLASAK
Sbjct: 517 WVNPDCGLKTRKYSEVKPALKNMVDAAKLLRTQLASAK 554


>ref|XP_003601341.1| Methionine synthase [Medicago truncatula] gi|355490389|gb|AES71592.1|
            Methionine synthase [Medicago truncatula]
          Length = 813

 Score =  303 bits (777), Expect = 2e-80
 Identities = 147/158 (93%), Positives = 155/158 (98%)
 Frame = -3

Query: 732  ALREGLPLRKSEQSFYLDWAVHSFRITNCGVKDTTQIHTHMCYSHFNDIIHSIIDMDADV 553
            ALREGLPLRKSE+SFYL+WAVHSFRITNCGV+DTTQIHTHMCYS+FNDIIHSIIDMDADV
Sbjct: 656  ALREGLPLRKSEESFYLNWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 715

Query: 552  ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNIL 373
            ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIP TEEIADRINKMLAVLE+NIL
Sbjct: 716  ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNIL 775

Query: 372  WVNPDCGLKTRKYPEVKPALTNMVSAAKILRKQLASAK 259
            WVNPDCGLKTRKY EVKPALTNMV AAK++RKQLAS+K
Sbjct: 776  WVNPDCGLKTRKYTEVKPALTNMVDAAKLIRKQLASSK 813


>gb|AAL73979.1|AF466201_8 methionine synthase protein [Sorghum bicolor]
          Length = 760

 Score =  303 bits (776), Expect = 2e-80
 Identities = 146/158 (92%), Positives = 154/158 (97%)
 Frame = -3

Query: 732  ALREGLPLRKSEQSFYLDWAVHSFRITNCGVKDTTQIHTHMCYSHFNDIIHSIIDMDADV 553
            ALREGLPLRKSE +FYLDWAVHSFRITNCGV+DTTQIHTHMCYS+FNDIIHSIIDMDADV
Sbjct: 603  ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADV 662

Query: 552  ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNIL 373
            ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIP+TEEIADR+NKMLAVL+TNIL
Sbjct: 663  ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPTTEEIADRVNKMLAVLDTNIL 722

Query: 372  WVNPDCGLKTRKYPEVKPALTNMVSAAKILRKQLASAK 259
            WVNPDCGLKTRKY EVKPALTNMVSA K++R QLASAK
Sbjct: 723  WVNPDCGLKTRKYTEVKPALTNMVSATKLIRTQLASAK 760


>ref|XP_002325856.1| vitamin-b12 independent methionine synthase,
            5-methyltetrahydropteroyltriglutamate-homocysteine
            [Populus trichocarpa] gi|222862731|gb|EEF00238.1|
            vitamin-b12 independent methionine synthase,
            5-methyltetrahydropteroyltriglutamate-homocysteine
            [Populus trichocarpa]
          Length = 765

 Score =  303 bits (776), Expect = 2e-80
 Identities = 149/158 (94%), Positives = 153/158 (96%)
 Frame = -3

Query: 732  ALREGLPLRKSEQSFYLDWAVHSFRITNCGVKDTTQIHTHMCYSHFNDIIHSIIDMDADV 553
            ALREGLPLRKSEQ+FYLDWAVHSFRITNCGV+DTTQIHTHMCYS+FNDII SIIDMDADV
Sbjct: 608  ALREGLPLRKSEQAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIQSIIDMDADV 667

Query: 552  ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNIL 373
            ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNIL
Sbjct: 668  ITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNIL 727

Query: 372  WVNPDCGLKTRKYPEVKPALTNMVSAAKILRKQLASAK 259
            WVNPDCGLKTRKY EVKPAL NMV AAK+LR QLASAK
Sbjct: 728  WVNPDCGLKTRKYTEVKPALKNMVDAAKLLRTQLASAK 765


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