BLASTX nr result

ID: Dioscorea21_contig00035743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035743
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA57207.1| TPA: cyclin superfamily protein, putative [Zea m...   237   8e-61
ref|NP_001149933.1| cyclin IaZm [Zea mays] gi|194708480|gb|ACF88...   237   8e-61
ref|XP_002458652.1| hypothetical protein SORBIDRAFT_03g037460 [S...   235   3e-60
gb|ACG24350.1| cyclin IaZm [Zea mays]                                 234   7e-60
gb|ACH78335.1| cyclin B1 [Phalaenopsis bellina]                       232   3e-59

>tpg|DAA57207.1| TPA: cyclin superfamily protein, putative [Zea mays]
          Length = 398

 Score =  237 bits (604), Expect = 8e-61
 Identities = 116/149 (77%), Positives = 135/149 (90%), Gaps = 4/149 (2%)
 Frame = +3

Query: 6   RPDNYMESQLEINAKMRAILADWLIEVHHKFELMPETLYLTFYVVDQYLSMAGILRKELQ 185
           RP +Y+++QLEIN+KMRAILADW+IEVHHKFELMPETLYLT Y++DQYLS+  +LRKELQ
Sbjct: 200 RPCDYIDAQLEINSKMRAILADWIIEVHHKFELMPETLYLTMYIIDQYLSLQPVLRKELQ 259

Query: 186 LVGVSSMLIACKYEEIWAPEVNDFICISDMAYTREDILAMEKEILNKLEWNLTVPSPYVF 365
           LVGVSSMLIACKYEEIWAPEVNDFI ISD AY+RE IL+MEK ILN+LEWNLTVP+ Y+F
Sbjct: 260 LVGVSSMLIACKYEEIWAPEVNDFILISDSAYSREQILSMEKGILNRLEWNLTVPTVYMF 319

Query: 366 LVRFLKAS----QCDEEMENMVFFFAELA 440
           LVRFLKA+    + ++EMENMVFFFAELA
Sbjct: 320 LVRFLKAATLGGKVEKEMENMVFFFAELA 348


>ref|NP_001149933.1| cyclin IaZm [Zea mays] gi|194708480|gb|ACF88324.1| unknown [Zea
           mays] gi|223949813|gb|ACN28990.1| unknown [Zea mays]
           gi|414880075|tpg|DAA57206.1| TPA: cyclin superfamily
           protein, putative [Zea mays]
          Length = 442

 Score =  237 bits (604), Expect = 8e-61
 Identities = 116/149 (77%), Positives = 135/149 (90%), Gaps = 4/149 (2%)
 Frame = +3

Query: 6   RPDNYMESQLEINAKMRAILADWLIEVHHKFELMPETLYLTFYVVDQYLSMAGILRKELQ 185
           RP +Y+++QLEIN+KMRAILADW+IEVHHKFELMPETLYLT Y++DQYLS+  +LRKELQ
Sbjct: 200 RPCDYIDAQLEINSKMRAILADWIIEVHHKFELMPETLYLTMYIIDQYLSLQPVLRKELQ 259

Query: 186 LVGVSSMLIACKYEEIWAPEVNDFICISDMAYTREDILAMEKEILNKLEWNLTVPSPYVF 365
           LVGVSSMLIACKYEEIWAPEVNDFI ISD AY+RE IL+MEK ILN+LEWNLTVP+ Y+F
Sbjct: 260 LVGVSSMLIACKYEEIWAPEVNDFILISDSAYSREQILSMEKGILNRLEWNLTVPTVYMF 319

Query: 366 LVRFLKAS----QCDEEMENMVFFFAELA 440
           LVRFLKA+    + ++EMENMVFFFAELA
Sbjct: 320 LVRFLKAATLGGKVEKEMENMVFFFAELA 348


>ref|XP_002458652.1| hypothetical protein SORBIDRAFT_03g037460 [Sorghum bicolor]
           gi|241930627|gb|EES03772.1| hypothetical protein
           SORBIDRAFT_03g037460 [Sorghum bicolor]
          Length = 449

 Score =  235 bits (599), Expect = 3e-60
 Identities = 114/149 (76%), Positives = 134/149 (89%), Gaps = 4/149 (2%)
 Frame = +3

Query: 6   RPDNYMESQLEINAKMRAILADWLIEVHHKFELMPETLYLTFYVVDQYLSMAGILRKELQ 185
           RP +Y+E+Q+EINAKMRAIL DW++EVHHKFELMPETLYLT Y++DQYLS+  +LR+ELQ
Sbjct: 207 RPCDYIEAQVEINAKMRAILVDWILEVHHKFELMPETLYLTMYIIDQYLSLQPVLRRELQ 266

Query: 186 LVGVSSMLIACKYEEIWAPEVNDFICISDMAYTREDILAMEKEILNKLEWNLTVPSPYVF 365
           LVGVS+MLIACKYEEIWAPEVNDFI ISD AYTRE IL+MEK ILN+LEWNLTVP+ Y+F
Sbjct: 267 LVGVSAMLIACKYEEIWAPEVNDFILISDSAYTREQILSMEKGILNRLEWNLTVPTVYMF 326

Query: 366 LVRFLKA----SQCDEEMENMVFFFAELA 440
           LVRFLKA    ++ ++EMENMVFFFAELA
Sbjct: 327 LVRFLKAATLGNKVEKEMENMVFFFAELA 355


>gb|ACG24350.1| cyclin IaZm [Zea mays]
          Length = 442

 Score =  234 bits (596), Expect = 7e-60
 Identities = 115/149 (77%), Positives = 134/149 (89%), Gaps = 4/149 (2%)
 Frame = +3

Query: 6   RPDNYMESQLEINAKMRAILADWLIEVHHKFELMPETLYLTFYVVDQYLSMAGILRKELQ 185
           RP +Y+++QLEIN+KMRAILADW+IEVHHKFELMPETLYLT Y++DQYLS+  +LRKELQ
Sbjct: 200 RPCDYIDAQLEINSKMRAILADWIIEVHHKFELMPETLYLTMYIIDQYLSLQPVLRKELQ 259

Query: 186 LVGVSSMLIACKYEEIWAPEVNDFICISDMAYTREDILAMEKEILNKLEWNLTVPSPYVF 365
           LVGVSSMLIACKYEEIWAPEVNDFI ISD AY+RE IL+MEK ILN+LEWNLTV + Y+F
Sbjct: 260 LVGVSSMLIACKYEEIWAPEVNDFILISDSAYSREQILSMEKGILNRLEWNLTVTTVYMF 319

Query: 366 LVRFLKAS----QCDEEMENMVFFFAELA 440
           LVRFLKA+    + ++EMENMVFFFAELA
Sbjct: 320 LVRFLKAATLGGKVEKEMENMVFFFAELA 348


>gb|ACH78335.1| cyclin B1 [Phalaenopsis bellina]
          Length = 427

 Score =  232 bits (591), Expect = 3e-59
 Identities = 111/144 (77%), Positives = 127/144 (88%)
 Frame = +3

Query: 9   PDNYMESQLEINAKMRAILADWLIEVHHKFELMPETLYLTFYVVDQYLSMAGILRKELQL 188
           P +YM SQ+EINAKMRAIL DWLIEVHHKFELMPETLYLT +++D++LSM  + RK LQL
Sbjct: 186 PRDYMGSQIEINAKMRAILVDWLIEVHHKFELMPETLYLTMFIIDRFLSMESVHRKVLQL 245

Query: 189 VGVSSMLIACKYEEIWAPEVNDFICISDMAYTREDILAMEKEILNKLEWNLTVPSPYVFL 368
           VG+S+MLIA KYEEIWAPEVNDFICISD AYTRE IL MEKEILNKL+W LT P+PYVF+
Sbjct: 246 VGISAMLIASKYEEIWAPEVNDFICISDRAYTREQILRMEKEILNKLDWKLTFPTPYVFV 305

Query: 369 VRFLKASQCDEEMENMVFFFAELA 440
           VRFLKA+  D+EME+M FFFAELA
Sbjct: 306 VRFLKAAVSDKEMEHMTFFFAELA 329


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