BLASTX nr result

ID: Dioscorea21_contig00035741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035741
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]        187   8e-46
ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group] g...   183   1e-44
gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japo...   183   1e-44
ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containi...   181   7e-44
ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containi...   172   2e-41

>gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  187 bits (475), Expect = 8e-46
 Identities = 84/126 (66%), Positives = 106/126 (84%)
 Frame = +2

Query: 2    VVWAALLGACRIQQNVELGRMVAEKLFQMEPQIAGNYVLLSNIYASRGMWNKVDEVRELM 181
            V+W+ALLGAC+I +NVE+GR  AEKLF +EP  AGNYV+LSNIY+S+GMW++V +VR+LM
Sbjct: 719  VIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLM 778

Query: 182  RARGVTKSPGCSWIQIRNKLHSFITGDKHHEQIVEIHALLKELYVKLKYAGYVPDTQFVL 361
            + RGV K PGCSW+QI+NK+HSF+TGD+ HEQI  I+A L ELY  LK  GYVPDT FVL
Sbjct: 779  KERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVL 838

Query: 362  HDVEEE 379
            HD++EE
Sbjct: 839  HDIDEE 844


>ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
            gi|51535971|dbj|BAD38052.1| putative pentatricopeptide
            (PPR) repeat-containing protein [Oryza sativa Japonica
            Group] gi|218190072|gb|EEC72499.1| hypothetical protein
            OsI_05871 [Oryza sativa Indica Group]
            gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa
            Japonica Group]
          Length = 922

 Score =  183 bits (465), Expect = 1e-44
 Identities = 82/126 (65%), Positives = 105/126 (83%)
 Frame = +2

Query: 2    VVWAALLGACRIQQNVELGRMVAEKLFQMEPQIAGNYVLLSNIYASRGMWNKVDEVRELM 181
            V+W+ALLGAC+I +N E+G+  AEKLF++EP  AGNYV+LSNIY+S GMW +V EVR++M
Sbjct: 720  VIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIM 779

Query: 182  RARGVTKSPGCSWIQIRNKLHSFITGDKHHEQIVEIHALLKELYVKLKYAGYVPDTQFVL 361
            + +GV K PGCSW QI++K+HSF+TGDK HEQI EI A L+ELY  LK  GYVPDT+FVL
Sbjct: 780  KQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVL 839

Query: 362  HDVEEE 379
            HD++EE
Sbjct: 840  HDIDEE 845


>gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  183 bits (465), Expect = 1e-44
 Identities = 82/126 (65%), Positives = 105/126 (83%)
 Frame = +2

Query: 2    VVWAALLGACRIQQNVELGRMVAEKLFQMEPQIAGNYVLLSNIYASRGMWNKVDEVRELM 181
            V+W+ALLGAC+I +N E+G+  AEKLF++EP  AGNYV+LSNIY+S GMW +V EVR++M
Sbjct: 720  VIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIM 779

Query: 182  RARGVTKSPGCSWIQIRNKLHSFITGDKHHEQIVEIHALLKELYVKLKYAGYVPDTQFVL 361
            + +GV K PGCSW QI++K+HSF+TGDK HEQI EI A L+ELY  LK  GYVPDT+FVL
Sbjct: 780  KQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVL 839

Query: 362  HDVEEE 379
            HD++EE
Sbjct: 840  HDIDEE 845


>ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Brachypodium distachyon]
          Length = 921

 Score =  181 bits (458), Expect = 7e-44
 Identities = 81/126 (64%), Positives = 104/126 (82%)
 Frame = +2

Query: 2    VVWAALLGACRIQQNVELGRMVAEKLFQMEPQIAGNYVLLSNIYASRGMWNKVDEVRELM 181
            V+W+ALLGAC+I +N E+GR  AEKLF  EP  AGNYV+LSNIY+S GMW +V E+R++M
Sbjct: 719  VIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIM 778

Query: 182  RARGVTKSPGCSWIQIRNKLHSFITGDKHHEQIVEIHALLKELYVKLKYAGYVPDTQFVL 361
            + RGV+K PGCSW+QIRNK+HSF+TGDK HE+I EI   L++LY  L+  GYVPDT+FVL
Sbjct: 779  KQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVL 838

Query: 362  HDVEEE 379
            HD++EE
Sbjct: 839  HDIDEE 844


>ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  172 bits (437), Expect = 2e-41
 Identities = 79/126 (62%), Positives = 102/126 (80%)
 Frame = +2

Query: 2    VVWAALLGACRIQQNVELGRMVAEKLFQMEPQIAGNYVLLSNIYASRGMWNKVDEVRELM 181
            V+W ALLGACRI +NVELG+ VAE+LFQM    +  YVLLSN++AS+GMW+KV E+R+LM
Sbjct: 856  VIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLM 915

Query: 182  RARGVTKSPGCSWIQIRNKLHSFITGDKHHEQIVEIHALLKELYVKLKYAGYVPDTQFVL 361
            + +G+TK PG SWIQ++NKLH F+TGD+ H+QI EI++ LKE Y   +  GY+PDT FVL
Sbjct: 916  KDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVL 975

Query: 362  HDVEEE 379
            HDVEEE
Sbjct: 976  HDVEEE 981


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