BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035736
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519191.1| pentatricopeptide repeat-containing protein,...   118   4e-25
ref|XP_002885175.1| pentatricopeptide repeat-containing protein ...   101   6e-20
ref|NP_188314.1| pentatricopeptide repeat-containing protein [Ar...   101   7e-20
ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat...   100   9e-20
ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   100   9e-20

>ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541506|gb|EEF43055.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  118 bits (296), Expect = 4e-25
 Identities = 65/116 (56%), Positives = 80/116 (68%)
 Frame = +1

Query: 58  KFPKYIDPDRLCVILSQKDWFLMLNTEFKSIAAHLGPQSVVSVLQKLENPLFSLKFYIWA 237
           K+ K ID      ILS+ DWFL+LN EFK+    L   SV SVLQ  ENPL+ LKFYIW 
Sbjct: 77  KYSKPIDHHYFSRILSRHDWFLLLNHEFKAKRITLNSHSVASVLQNQENPLYPLKFYIWV 136

Query: 238 SNLDDKFAKDRFVRKVLVELLWRKGPVVLSVELVNEIRSSSCGIITEDLLCILMCS 405
           SN+D  FAKD+ V+ VL   L+RKGPVVLSVEL+ +I++S    I E+LLCIL+ S
Sbjct: 137 SNMDPLFAKDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYR-INEELLCILIGS 191


>ref|XP_002885175.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331015|gb|EFH61434.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 653

 Score =  101 bits (252), Expect = 6e-20
 Identities = 50/103 (48%), Positives = 74/103 (71%)
 Frame = +1

Query: 97  ILSQKDWFLMLNTEFKSIAAHLGPQSVVSVLQKLENPLFSLKFYIWASNLDDKFAKDRFV 276
           ++ +KDWFL+LN EF +    L  + V+SVLQ  +NPL SL+FY+W SN D  +AKD+ +
Sbjct: 47  VIERKDWFLILNQEFTTHRIGLNIRFVISVLQNQDNPLHSLRFYLWVSNTDPVYAKDQSL 106

Query: 277 RKVLVELLWRKGPVVLSVELVNEIRSSSCGIITEDLLCILMCS 405
           + VL   L+RKGP++LS+EL+ EIR S    IT++L+C+L+ S
Sbjct: 107 KSVLGNALFRKGPLLLSMELLKEIRESGYR-ITDELMCVLIGS 148


>ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g16890, mitochondrial; AltName: Full=Protein
           PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
           gi|7670019|dbj|BAA94973.1| salt-inducible protein-like
           [Arabidopsis thaliana] gi|332642359|gb|AEE75880.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 659

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/103 (47%), Positives = 74/103 (71%)
 Frame = +1

Query: 97  ILSQKDWFLMLNTEFKSIAAHLGPQSVVSVLQKLENPLFSLKFYIWASNLDDKFAKDRFV 276
           ++ +KDWFL+LN EF +    L  + V+SVLQ  +NPL SL+FY+W SN D  +AKD+ +
Sbjct: 53  VIERKDWFLILNQEFTTHRIGLNTRFVISVLQNQDNPLHSLRFYLWVSNFDPVYAKDQSL 112

Query: 277 RKVLVELLWRKGPVVLSVELVNEIRSSSCGIITEDLLCILMCS 405
           + VL   L+RKGP++LS+EL+ EIR S    I+++L+C+L+ S
Sbjct: 113 KSVLGNALFRKGPLLLSMELLKEIRDSGYR-ISDELMCVLIGS 154


>ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  100 bits (250), Expect = 9e-20
 Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
 Frame = +1

Query: 67  KYIDPDRLCVILSQKDWFLMLNTEFKSIAAHLGPQSVVSVLQKLENPLFSLKFYIWASNL 246
           K ID   +  IL  KDWFL+LN EFK+    L PQ VVS+LQ  +NPL +++FYIW SN+
Sbjct: 89  KPIDRSYISKILLSKDWFLLLNHEFKAKRVVLSPQFVVSILQNQDNPLSAIRFYIWVSNV 148

Query: 247 DDKFAKDRFVRKVLVELLWRKG---PVVLSVELVNEIRSSSCGIITEDLLCILMCS 405
           D    K + ++ VLV  L R+G   PV+LSV+L+ +I+ S    +TE+LLCIL  S
Sbjct: 149 DPLLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESGLK-VTEELLCILFGS 203


>ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g16890, mitochondrial-like
           [Cucumis sativus]
          Length = 688

 Score =  100 bits (250), Expect = 9e-20
 Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
 Frame = +1

Query: 67  KYIDPDRLCVILSQKDWFLMLNTEFKSIAAHLGPQSVVSVLQKLENPLFSLKFYIWASNL 246
           K ID   +  IL  KDWFL+LN EFK+    L PQ VVS+LQ  +NPL +++FYIW SN+
Sbjct: 89  KPIDRSYISKILLSKDWFLLLNHEFKAKRVVLSPQFVVSILQNQDNPLSAIRFYIWVSNV 148

Query: 247 DDKFAKDRFVRKVLVELLWRKG---PVVLSVELVNEIRSSSCGIITEDLLCILMCS 405
           D    K + ++ VLV  L R+G   PV+LSV+L+ +I+ S    +TE+LLCIL  S
Sbjct: 149 DPLLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESGLK-VTEELLCILFGS 203