BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035700
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...    93   2e-17
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    93   3e-17
ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [S...    86   3e-15
emb|CAN83561.1| hypothetical protein VITISV_024106 [Vitis vinifera]    81   8e-14
emb|CAN81818.1| hypothetical protein VITISV_009635 [Vitis vinifera]    81   8e-14

>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   VAYVRACLAATSFSIIVCGKPSSWFQPTRGVRQGDPLSAYIFILVAQNLTAILNKARLLG 181
           + ++ AC+++ S+S+++ G+P     P RG+RQGDPLS ++F+L  + L  ILN+A  +G
Sbjct: 332 INWMMACVSSVSYSVLINGQPFGHITPHRGLRQGDPLSPFLFVLCTEALIHILNQAEKIG 391

Query: 182 LIPGFSIN-LKHNFNHLMYADDLILVSSAFRKSARNIGFCLKLYAHLSSQFPNRNKYEVY 358
            I G   N    + NHL++ADD +L+  A +     I  CL  Y H+S Q  N  K  + 
Sbjct: 392 KISGIQFNGTGPSVNHLLFADDTLLICKASQLECAEIMHCLSQYGHISGQMINSEKSAIT 451

Query: 359 F 361
           F
Sbjct: 452 F 452


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   VAYVRACLAATSFSIIVCGKPSSWFQPTRGVRQGDPLSAYIFILVAQNLTAILNKARLLG 181
           ++++  C+ + S+S+++ G+P     PTRG+RQGDPLS  +F+L  + L  ILNKA   G
Sbjct: 602 ISWIMNCVTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAG 661

Query: 182 LIPGFSI-NLKHNFNHLMYADDLILVSSAFRKSARNIGFCLKLYAHLSSQFPNRNKYEVY 358
            I G    + K + NHL++ADD +L+  A ++    +  CL  Y  LS Q  N NK  + 
Sbjct: 662 KITGIQFQDKKVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAIT 721

Query: 359 F 361
           F
Sbjct: 722 F 722


>ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [Sorghum bicolor]
           gi|241943773|gb|EES16918.1| hypothetical protein
           SORBIDRAFT_08g007680 [Sorghum bicolor]
          Length = 649

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   VAYVRACLAATSFSIIVCGKPSSWFQPTRGVRQGDPLSAYIFILVAQNLTAILNKARLLG 181
           V  +  C+   SFSI V G P+  F+PTRG+RQGDP+S Y+F+L ++ L+ +L     + 
Sbjct: 163 VRMIMKCVTTVSFSIRVNGVPTQSFRPTRGIRQGDPISPYLFLLCSEGLSCLLKSIGPMH 222

Query: 182 LIPGFSINLKHNF-NHLMYADDLILVSSAFRKSARNIGFCLKLYAHLSSQFPNRNKYEVY 358
           L  G  + +   + +HL++ADD I+ S A ++ A  +   L +Y   S Q  NR K  V+
Sbjct: 223 LARGVRVGIHSPWISHLLFADDSIVFSEASQRGAERLMEILDIYNRGSGQLVNREKSTVF 282

Query: 359 F 361
           F
Sbjct: 283 F 283


>emb|CAN83561.1| hypothetical protein VITISV_024106 [Vitis vinifera]
          Length = 1750

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
 Frame = +2

Query: 8    YVRACLAATSFSIIVCGKPSSWFQPTRGVRQGDPLSAYIFILVAQNLTAILNKARLLGLI 187
            ++  CL++ SF+I+V G    W + +RG+RQGDPLS ++F LVA  L+ +L +A    ++
Sbjct: 1212 WMSGCLSSVSFAILVNGSAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLMRAEERNML 1271

Query: 188  PGFSINL-KHNFNHLMYADDLILVSSAFRKSARNIGFCLKLYAHLSSQFPNRNKYEVY 358
             GF +   +   +HL +ADD I  S++  +  + +   L ++ H+S    N NK  +Y
Sbjct: 1272 EGFRVGRNRTRVSHLQFADDTIFFSNSREEELQTLKSLLLVFGHISGLKVNLNKSSIY 1329


>emb|CAN81818.1| hypothetical protein VITISV_009635 [Vitis vinifera]
          Length = 1014

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
 Frame = +2

Query: 8   YVRACLAATSFSIIVCGKPSSWFQPTRGVRQGDPLSAYIFILVAQNLTAILNKARLLGLI 187
           ++R CL++ SF+++V G    W + +RG+RQGDPLS ++F +VA  L+ +L KA    ++
Sbjct: 163 WMRGCLSSVSFAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVL 222

Query: 188 PGFSINL-KHNFNHLMYADDLILVSSAFRKSARNIGFCLKLYAHLSSQFPNRNKYEVY 358
            GF +   +   +HL +ADD I  SS+  +    +   L ++ H+S    N +K  +Y
Sbjct: 223 EGFKVGRNRTRVSHLQFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIY 280