BLASTX nr result

ID: Dioscorea21_contig00035688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035688
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533713.1| structural constituent of cell wall, putativ...    90   2e-16
ref|XP_002318800.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|NP_200248.1| late embryogenesis abundant protein-like protei...    85   7e-15
ref|XP_002284614.1| PREDICTED: uncharacterized protein LOC100246...    84   2e-14
ref|XP_002267118.2| PREDICTED: uncharacterized protein LOC100241...    81   8e-14

>ref|XP_002533713.1| structural constituent of cell wall, putative [Ricinus communis]
           gi|223526387|gb|EEF28676.1| structural constituent of
           cell wall, putative [Ricinus communis]
          Length = 340

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 38/76 (50%), Positives = 50/76 (65%)
 Frame = +1

Query: 1   QTYRPDFENPVKRGVSMPIMSGEERYITSSLLSPSCKYCIFSPEKKKNVVGKKEISHGAM 180
           +TYRPDFENP K GV+MP++ GEE+Y T SLLSP C+ CIFS +          I +G +
Sbjct: 265 RTYRPDFENPAKPGVAMPVLGGEEKYRTPSLLSPDCQSCIFSTQSGSKQEASSSIDYGTL 324

Query: 181 DCTSEVTNGYRVACRR 228
           DCT   + GY + CR+
Sbjct: 325 DCTRGASAGYGIVCRK 340


>ref|XP_002318800.1| predicted protein [Populus trichocarpa] gi|222859473|gb|EEE97020.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/80 (56%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
 Frame = +1

Query: 1   QTYRPDFENPVKRGVSMPIMSGEERYITSSLLSPSCKYCIFSPEKKKNVVGKKEI--SHG 174
           QTYRPDFENPVKRGV MPIM GE +Y TSSL+S  C  CIFSP  K     K     +  
Sbjct: 239 QTYRPDFENPVKRGVPMPIMGGENKYKTSSLVSADCNLCIFSPSSKPQYAAKLLALNTDS 298

Query: 175 AMDCTSEVTNGYR--VACRR 228
            +DCTS   NG+   V CRR
Sbjct: 299 TLDCTSNTGNGHGSVVFCRR 318


>ref|NP_200248.1| late embryogenesis abundant protein-like protein [Arabidopsis
           thaliana] gi|10257484|dbj|BAB10109.1| root cap protein
           2-like protein [Arabidopsis thaliana]
           gi|71143048|gb|AAZ23915.1| At5g54370 [Arabidopsis
           thaliana] gi|332009106|gb|AED96489.1| late embryogenesis
           abundant protein-like protein [Arabidopsis thaliana]
          Length = 337

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 37/76 (48%), Positives = 52/76 (68%)
 Frame = +1

Query: 1   QTYRPDFENPVKRGVSMPIMSGEERYITSSLLSPSCKYCIFSPEKKKNVVGKKEISHGAM 180
           +TYRPDF+NP K GV+MP++ GE+ + TSSLLS  CK CIFS  + +    K EI +  +
Sbjct: 262 RTYRPDFQNPAKPGVAMPVVGGEDSFKTSSLLSNDCKTCIFSESQAEIDSVKSEIEYATL 321

Query: 181 DCTSEVTNGYRVACRR 228
           DCT   ++GY + CR+
Sbjct: 322 DCTRGASSGYGIVCRK 337


>ref|XP_002284614.1| PREDICTED: uncharacterized protein LOC100246927 [Vitis vinifera]
           gi|302143064|emb|CBI20359.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 36/76 (47%), Positives = 52/76 (68%)
 Frame = +1

Query: 1   QTYRPDFENPVKRGVSMPIMSGEERYITSSLLSPSCKYCIFSPEKKKNVVGKKEISHGAM 180
           QTY+PDFENPVK GV+MP++ GE++Y T+SLLS  C+ C+FSP    +      + +G +
Sbjct: 263 QTYQPDFENPVKPGVAMPVVGGEDKYRTTSLLSADCRSCLFSPAGVFDQKDTLIMDYGTL 322

Query: 181 DCTSEVTNGYRVACRR 228
           DCT   T+G  + CR+
Sbjct: 323 DCTGGATSGMGIVCRK 338


>ref|XP_002267118.2| PREDICTED: uncharacterized protein LOC100241834 [Vitis vinifera]
          Length = 348

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/76 (48%), Positives = 49/76 (64%)
 Frame = +1

Query: 1   QTYRPDFENPVKRGVSMPIMSGEERYITSSLLSPSCKYCIFSPEKKKNVVGKKEISHGAM 180
           QTY+P+F N  K GV+MPI+ G E+Y TSSLLS  CK C+FSP       G   + + A+
Sbjct: 273 QTYQPNFHNTAKAGVAMPIVGGAEKYRTSSLLSADCKSCLFSPSNNVTGEGLLSMEYAAL 332

Query: 181 DCTSEVTNGYRVACRR 228
           DCTS V +G  + CR+
Sbjct: 333 DCTSGVGSGNGIVCRK 348


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