BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035686
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33742.3| unnamed protein product [Vitis vinifera]              112   3e-23
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   111   5e-23
gb|AFW62799.1| putative pentatricopeptide repeat family protein ...   110   9e-23
emb|CBI29860.3| unnamed protein product [Vitis vinifera]              110   9e-23

>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/126 (44%), Positives = 80/126 (63%)
 Frame = -3

Query: 378 IAWNAMLSGYVQNDLLDDALKLFDRMWSAGVAPTAVTVISVLSACGGAKDFSLGRQVHGF 199
           + WN M+ GY QN + ++AL LF RM  A   P  VTV+SVLSACG       GR VH +
Sbjct: 156 VCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSY 215

Query: 198 VKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIKDVGVWNALIGGHVHNGCFS 19
           ++ + +QF   + VGT L+DMY+KCG LE +  VFD++  KDV  WN++I G+  +G   
Sbjct: 216 IENNGIQF--NVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQ 273

Query: 18  DVLRIF 1
           + L++F
Sbjct: 274 EALQLF 279



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
 Frame = -3

Query: 381 VIAWNAMLSGYVQNDLLDDALKLFDRMWSAGVAPTAVTVISVLSACGGAKDFSLGRQVHG 202
           V+AWN+M+ GY  +    +AL+LF  M   G+ PT +T I +LSACG +   + G  +  
Sbjct: 256 VVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN 315

Query: 201 FVKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIK-DVGVWNALIG 46
            +K      E ++    C++++  + G +E + ++   M I+ D  +W  L+G
Sbjct: 316 KMKDE-YGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLG 367


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/126 (44%), Positives = 80/126 (63%)
 Frame = -3

Query: 378 IAWNAMLSGYVQNDLLDDALKLFDRMWSAGVAPTAVTVISVLSACGGAKDFSLGRQVHGF 199
           + WN M+ GY QN + ++AL LF RM  A   P  VTV+SVLSACG       GR VH +
Sbjct: 222 VCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSY 281

Query: 198 VKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIKDVGVWNALIGGHVHNGCFS 19
           ++ + +QF   + VGT L+DMY+KCG LE +  VFD++  KDV  WN++I G+  +G   
Sbjct: 282 IENNGIQF--NVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQ 339

Query: 18  DVLRIF 1
           + L++F
Sbjct: 340 EALQLF 345



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
 Frame = -3

Query: 381 VIAWNAMLSGYVQNDLLDDALKLFDRMWSAGVAPTAVTVISVLSACGGAKDFSLGRQVHG 202
           V+AWN+M+ GY  +    +AL+LF  M   G+ PT +T I +LSACG +   + G  +  
Sbjct: 322 VVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN 381

Query: 201 FVKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIK-DVGVWNALIG 46
            +K      E ++    C++++  + G +E + ++   M I+ D  +W  L+G
Sbjct: 382 KMKDE-YGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLG 433


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/126 (44%), Positives = 79/126 (62%)
 Frame = -3

Query: 378 IAWNAMLSGYVQNDLLDDALKLFDRMWSAGVAPTAVTVISVLSACGGAKDFSLGRQVHGF 199
           + WN M+ GY QN + ++AL LF RM  A   P  VTV+SVLSACG       GR VH +
Sbjct: 169 VCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSY 228

Query: 198 VKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIKDVGVWNALIGGHVHNGCFS 19
           ++ + +QF   + VGT L+DMY+KCG LE +  VFD++  KDV  WN++I G+   G   
Sbjct: 229 IENNGIQF--NVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQ 286

Query: 18  DVLRIF 1
           + L++F
Sbjct: 287 EALQLF 292



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = -3

Query: 381 VIAWNAMLSGYVQNDLLDDALKLFDRMWSAGVAPTAVTVISVLSACGGAKDFSLGRQVHG 202
           V+AWN+M+ GY       +AL+LF  M   G+ PT +T I +LSACG +   + G  +  
Sbjct: 269 VVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN 328

Query: 201 FVKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIK-DVGVWNALIG 46
            +K      E ++    C++++  + G +E + ++   M I+ D  +W  L+G
Sbjct: 329 KMKDE-YGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLG 380


>gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  110 bits (276), Expect = 9e-23
 Identities = 60/127 (47%), Positives = 83/127 (65%)
 Frame = -3

Query: 381 VIAWNAMLSGYVQNDLLDDALKLFDRMWSAGVAPTAVTVISVLSACGGAKDFSLGRQVHG 202
           V++WNA +SG V +     AL+L  +M S+G+ P   T+ SVL AC GA  F+LGRQ+HG
Sbjct: 271 VVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHG 330

Query: 201 FVKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIKDVGVWNALIGGHVHNGCF 22
           F+ K+V  F+   FV   L+DMYAK G L+ + KVFD M  +D+ +WNALI G  H+G  
Sbjct: 331 FMVKAVADFDE--FVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRH 388

Query: 21  SDVLRIF 1
            +VL +F
Sbjct: 389 GEVLSLF 395



 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/117 (40%), Positives = 71/117 (60%)
 Frame = -3

Query: 378 IAWNAMLSGYVQNDLLDDALKLFDRMWSAGVAPTAVTVISVLSACGGAKDFSLGRQVHGF 199
           ++WN M+S YV+ND   DA+ +F  M  +G  P       V++AC G++D   GRQVHG 
Sbjct: 171 VSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGA 230

Query: 198 VKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIKDVGVWNALIGGHVHNG 28
           V ++   +E+++F    L+DMY+K G +E +  VF++M   DV  WNA I G V +G
Sbjct: 231 VVRT--GYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHG 285



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/127 (32%), Positives = 68/127 (53%)
 Frame = -3

Query: 381 VIAWNAMLSGYVQNDLLDDALKLFDRMWSAGVAPTAVTVISVLSACGGAKDFSLGRQVHG 202
           +I+   M++   Q D  +DA+KLF +M   G+ P +  + S+L+AC     +  G+QVH 
Sbjct: 475 IISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHA 534

Query: 201 FVKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIKDVGVWNALIGGHVHNGCF 22
            + K   QF  ++F G  L+  YAKCG +E +   F  +  + +  W+A+IGG   +G  
Sbjct: 535 HLIKR--QFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHG 592

Query: 21  SDVLRIF 1
              L +F
Sbjct: 593 KRALDLF 599



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = -3

Query: 381 VIAWNAMLSGYVQNDLLDDALKLFDRMWSAGVAPTAVTVISVLSACGGAKDFSLGRQVHG 202
           +++W+AM+ G  Q+     AL LF RM   GVAP  +T+ SVLSAC  A      ++   
Sbjct: 576 IVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFE 635

Query: 201 FVKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIK-DVGVWNALIG 46
            +K++    +R      C+ID+  + G LE ++++ + M  + +  VW AL+G
Sbjct: 636 SMKET-FGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLG 687



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
 Frame = -3

Query: 381 VIAWNAMLSGYVQNDLLDDALKLFDRMWSAGVA--PTAVTVISVLSACGGAKDFSLGRQV 208
           +I WNA++SG   +    + L LF RM   G+       T+ SVL +   ++     RQV
Sbjct: 372 LILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQV 431

Query: 207 HGFVKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIKDV 70
           H   +K  +  +  +  G  LID Y KCG L++++KVF E R  D+
Sbjct: 432 HALAEKIGLLSDSHVING--LIDSYWKCGQLDYAIKVFKESRSDDI 475


>emb|CBI29860.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/127 (41%), Positives = 81/127 (63%)
 Frame = -3

Query: 381 VIAWNAMLSGYVQNDLLDDALKLFDRMWSAGVAPTAVTVISVLSACGGAKDFSLGRQVHG 202
           ++AW+ M+SGY +  L+++AL LF  M  AGV P  VT++SV+SAC  +     G+ VH 
Sbjct: 227 LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHA 286

Query: 201 FVKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIKDVGVWNALIGGHVHNGCF 22
           ++ K +++ + EL   T L++MYAKCGC+E + +VFD M +KD   W+++I G   NG  
Sbjct: 287 YINKQLIETDLEL--STALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLA 344

Query: 21  SDVLRIF 1
            D L  F
Sbjct: 345 EDALEEF 351



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = -3

Query: 381 VIAWNAMLSGYVQNDLLD-DALKLFDRMWSAGVA-PTAVTVISVLSACGGAKDFSLGRQV 208
           + +WN+M+ G  Q+     + + LF +M   G   P   T+  VL AC        G+QV
Sbjct: 124 IFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQV 183

Query: 207 HGFVKKSVMQFERELFVGTCLIDMYAKCGCLEFSLKVFDEMRIKDVGVWNALIGGHVHNG 28
           H  V KS   F    FV T L++ YAKC  +  + KVFDE+  +++  W+ +I G+   G
Sbjct: 184 HANVLKS--GFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIG 241

Query: 27  CFSDVLRIF 1
             ++ L +F
Sbjct: 242 LVNEALGLF 250