BLASTX nr result

ID: Dioscorea21_contig00035673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035673
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276495.1| PREDICTED: uncharacterized protein LOC100265...    96   2e-18
ref|XP_002457535.1| hypothetical protein SORBIDRAFT_03g008920 [S...    87   2e-15
tpg|DAA53874.1| TPA: hypothetical protein ZEAMMB73_525837 [Zea m...    85   5e-15
ref|XP_002867893.1| EMB1895 [Arabidopsis lyrata subsp. lyrata] g...    78   8e-13
ref|NP_193739.1| integrator complex subunit 7 [Arabidopsis thali...    77   1e-12

>ref|XP_002276495.1| PREDICTED: uncharacterized protein LOC100265170 [Vitis vinifera]
            gi|296082233|emb|CBI21238.3| unnamed protein product
            [Vitis vinifera]
          Length = 1166

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
 Frame = -3

Query: 360  CIQLKNAGSN--VQVCEMHCVITTSLSHRVTTGAEGRDRQANIAFETEKIEEMVKLNEML 187
            C+QLKN   +  +Q+ +++C++    S       E   ++    + + +I++M+ LNE L
Sbjct: 1011 CLQLKNVPPDRPIQLTKLYCILYCKASFGTPKPIEENKQRMQSGYHSWEIDDMIDLNESL 1070

Query: 186  LLHLRSDSKDTPRKHSVVFDGSD-TATAFISFEPNERGQGFSTCLLDVSAFPEGVYQIKW 10
              H+  D K T  K   V +G      AF+ FEPNERGQGFSTCLLDVS FP G Y+IKW
Sbjct: 1071 FQHVTEDGKTTNAKLRSVDNGDGGVVKAFVCFEPNERGQGFSTCLLDVSGFPVGSYKIKW 1130

Query: 9    QS 4
             S
Sbjct: 1131 HS 1132


>ref|XP_002457535.1| hypothetical protein SORBIDRAFT_03g008920 [Sorghum bicolor]
            gi|241929510|gb|EES02655.1| hypothetical protein
            SORBIDRAFT_03g008920 [Sorghum bicolor]
          Length = 870

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/111 (41%), Positives = 65/111 (58%)
 Frame = -3

Query: 336  SNVQVCEMHCVITTSLSHRVTTGAEGRDRQANIAFETEKIEEMVKLNEMLLLHLRSDSKD 157
            S ++  +++C++ TSL       A  R +Q    F+  +  EMV+LN  LL +++SD + 
Sbjct: 739  SAIRAVKLYCILATSLE-TCLDAAGTRSKQ----FDPRRTTEMVELNSKLLQYIKSDLRK 793

Query: 156  TPRKHSVVFDGSDTATAFISFEPNERGQGFSTCLLDVSAFPEGVYQIKWQS 4
               +      G D  TAF  FEP + GQGFS CLLDVS+FPEG YQIKW +
Sbjct: 794  AKNETKNSHCGMDMVTAFACFEPTDSGQGFSGCLLDVSSFPEGSYQIKWHA 844


>tpg|DAA53874.1| TPA: hypothetical protein ZEAMMB73_525837 [Zea mays]
          Length = 1130

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/111 (39%), Positives = 67/111 (60%)
 Frame = -3

Query: 336  SNVQVCEMHCVITTSLSHRVTTGAEGRDRQANIAFETEKIEEMVKLNEMLLLHLRSDSKD 157
            S +++ +++C++  SL   + T A  R +Q    F+  +  EMV+LN  LL ++++D + 
Sbjct: 999  STIRIVKLYCILAASLETCLDT-AGTRSKQ----FDQHRTAEMVELNSKLLQYIKNDLRK 1053

Query: 156  TPRKHSVVFDGSDTATAFISFEPNERGQGFSTCLLDVSAFPEGVYQIKWQS 4
               +        +  TAF  FEP + GQGFS CLLDVS+FPEG YQIKWQ+
Sbjct: 1054 ARNEKKNSHSVMEMVTAFACFEPTDSGQGFSGCLLDVSSFPEGSYQIKWQA 1104


>ref|XP_002867893.1| EMB1895 [Arabidopsis lyrata subsp. lyrata]
            gi|297313729|gb|EFH44152.1| EMB1895 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1134

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
 Frame = -3

Query: 360  CIQLKNAGSN---VQVCEMHCVITTSLSHRVTTGAEGRDRQANIAFETEKIEEMVKLNEM 190
            C+QLKNA      V++ +++C++ T L++   T   G   +   ++   + E++V+++  
Sbjct: 988  CLQLKNAQQQQVPVRLNKLYCLLYTKLAYHTPT-QHGETNRNQKSYTPWRDEDLVEMSNK 1046

Query: 189  LLLHLRSDSKDTPRKHSVVFDGSDTATAFISFEPNERGQGFSTCLLDVSAFPEGVYQIKW 10
            L  H     K         +  S  +T  + FEPNERGQGFS+CLLDVS FP G YQIKW
Sbjct: 1047 LFHHAIKSGKKPEVSGRFDWTKSGVSTV-VQFEPNERGQGFSSCLLDVSHFPVGSYQIKW 1105

Query: 9    QS 4
             S
Sbjct: 1106 LS 1107


>ref|NP_193739.1| integrator complex subunit 7 [Arabidopsis thaliana]
            gi|2827660|emb|CAA16614.1| hypothetical protein
            [Arabidopsis thaliana] gi|7268801|emb|CAB79006.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332658868|gb|AEE84268.1| integrator complex subunit 7
            [Arabidopsis thaliana]
          Length = 1134

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
 Frame = -3

Query: 360  CIQLKNAGSN---VQVCEMHCVITTSLSHRVTTGAEGRDRQANIAFETEKIEEMVKLNEM 190
            C+QLKN       V++ +++C++ T L++   T   G + +  +++   + E++++++  
Sbjct: 988  CLQLKNIKQRQVPVRLNKLYCLLYTKLAYHSPT-QHGENNRNQMSYSPWRDEDLIEMSNK 1046

Query: 189  LLLHLRSDSKDTPRKHSVVFDGSDTATAFISFEPNERGQGFSTCLLDVSAFPEGVYQIKW 10
            L  H     K         +  S  +T  + FEPNERGQGFS+CLLDVS FP G YQIKW
Sbjct: 1047 LFHHAIKSGKKPDVSGRFDWAKSGVSTV-VQFEPNERGQGFSSCLLDVSRFPVGSYQIKW 1105

Query: 9    QS 4
             S
Sbjct: 1106 LS 1107


Top