BLASTX nr result

ID: Dioscorea21_contig00035646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035646
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat...   148   5e-34
emb|CBI30291.3| unnamed protein product [Vitis vinifera]              148   5e-34
emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]   148   5e-34
ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containi...   132   3e-29
gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Jap...   131   5e-29

>ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/100 (73%), Positives = 85/100 (85%)
 Frame = +2

Query: 5   KFGFQKEIFICNALTDMYSKSGDMDSASRVSGLDSGTWNVVSCSSLIDGYVELEQIEKAL 184
           K GF+ +IF+ NALTDMYSK+GDM+SAS V G+DS   NVVS + LIDGYVE EQIEK L
Sbjct: 235 KLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGL 294

Query: 185 SVYVESRRLGVEPNEFTFSSMVKACAGQAALEQGTQLHSQ 304
           SV+VE RR G+EPNEFTFSS++KACA QAALEQGTQLH+Q
Sbjct: 295 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQ 334



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/96 (32%), Positives = 53/96 (55%)
 Frame = +2

Query: 11  GFQKEIFICNALTDMYSKSGDMDSASRVSGLDSGTWNVVSCSSLIDGYVELEQIEKALSV 190
           G+    F+ N L +MYSK G++D A ++        N+VS +++I G  +  +  +A+  
Sbjct: 35  GYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQR-NLVSWTAMISGLSQNSKFSEAIRT 93

Query: 191 YVESRRLGVEPNEFTFSSMVKACAGQAALEQGTQLH 298
           +   R  G  P +F FSS ++ACA   ++E G Q+H
Sbjct: 94  FCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH 129


>emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/100 (73%), Positives = 85/100 (85%)
 Frame = +2

Query: 5   KFGFQKEIFICNALTDMYSKSGDMDSASRVSGLDSGTWNVVSCSSLIDGYVELEQIEKAL 184
           K GF+ +IF+ NALTDMYSK+GDM+SAS V G+DS   NVVS + LIDGYVE EQIEK L
Sbjct: 170 KLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGL 229

Query: 185 SVYVESRRLGVEPNEFTFSSMVKACAGQAALEQGTQLHSQ 304
           SV+VE RR G+EPNEFTFSS++KACA QAALEQGTQLH+Q
Sbjct: 230 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQ 269


>emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/100 (73%), Positives = 85/100 (85%)
 Frame = +2

Query: 5   KFGFQKEIFICNALTDMYSKSGDMDSASRVSGLDSGTWNVVSCSSLIDGYVELEQIEKAL 184
           K GF+ +IF+ NALTDMYSK+GDM+SAS V G+DS   NVVS + LIDGYVE EQIEK L
Sbjct: 235 KLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGL 294

Query: 185 SVYVESRRLGVEPNEFTFSSMVKACAGQAALEQGTQLHSQ 304
           SV+VE RR G+EPNEFTFSS++KACA QAALEQGTQLH+Q
Sbjct: 295 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQ 334



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/96 (32%), Positives = 53/96 (55%)
 Frame = +2

Query: 11  GFQKEIFICNALTDMYSKSGDMDSASRVSGLDSGTWNVVSCSSLIDGYVELEQIEKALSV 190
           G+    F+ N L +MYSK G++D A ++        N+VS +++I G  +  +  +A+  
Sbjct: 35  GYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQR-NLVSWTAMISGLSQNSKFSEAIRT 93

Query: 191 YVESRRLGVEPNEFTFSSMVKACAGQAALEQGTQLH 298
           +   R  G  P +F FSS ++ACA   ++E G Q+H
Sbjct: 94  FCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH 129


>ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/100 (63%), Positives = 82/100 (82%)
 Frame = +2

Query: 5   KFGFQKEIFICNALTDMYSKSGDMDSASRVSGLDSGTWNVVSCSSLIDGYVELEQIEKAL 184
           K GF++E+ + NALTDMY+K+ DMD+A+RV  +D G+ NVVS +SLIDGY+E + IEKAL
Sbjct: 249 KSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKAL 308

Query: 185 SVYVESRRLGVEPNEFTFSSMVKACAGQAALEQGTQLHSQ 304
            +++E RR GVEPNEFTFSSM+K CA QA LEQG QLH++
Sbjct: 309 LMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAE 348


>gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
           gi|31432781|gb|AAP54374.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 698

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/100 (64%), Positives = 80/100 (80%)
 Frame = +2

Query: 5   KFGFQKEIFICNALTDMYSKSGDMDSASRVSGLDSGTWNVVSCSSLIDGYVELEQIEKAL 184
           K GF+ E+ + NAL DMY+KS D++SASRV  +D G WNVVS +S+IDGY+E + +E+AL
Sbjct: 252 KAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEAL 311

Query: 185 SVYVESRRLGVEPNEFTFSSMVKACAGQAALEQGTQLHSQ 304
            +YVE RR GVEPNEFTFSSM+K CA QA LEQG QLH+Q
Sbjct: 312 VIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQ 351


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