BLASTX nr result

ID: Dioscorea21_contig00035632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035632
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523765.1| clathrin assembly protein, putative [Ricinus...    59   4e-07
ref|XP_003547072.1| PREDICTED: putative clathrin assembly protei...    59   5e-07
ref|XP_002874903.1| hypothetical protein ARALYDRAFT_911949 [Arab...    59   5e-07
ref|XP_002889433.1| hypothetical protein ARALYDRAFT_470282 [Arab...    58   9e-07
ref|NP_171804.1| putative clathrin assembly protein [Arabidopsis...    58   9e-07

>ref|XP_002523765.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223536977|gb|EEF38614.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 578

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/79 (43%), Positives = 43/79 (54%)
 Frame = -2

Query: 402 EQSRADGWDFSTFVRAYARYLDERLEYRMHGXXXXXXXXRAVSLSEDDEDXXXXXXXXXX 223
           + SR++ WD+S FVR YA YLDERLEYRM G         A  + ED+E           
Sbjct: 127 DTSRSNSWDYSAFVRTYALYLDERLEYRMQG---RRGRRSAFGIDEDEE----ATGTICV 179

Query: 222 XXXXXREMKTDMIFVKMQH 166
                REMKTD +F ++QH
Sbjct: 180 RSTPVREMKTDHVFSRIQH 198


>ref|XP_003547072.1| PREDICTED: putative clathrin assembly protein At1g03050-like
           [Glycine max]
          Length = 596

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/79 (40%), Positives = 40/79 (50%)
 Frame = -2

Query: 402 EQSRADGWDFSTFVRAYARYLDERLEYRMHGXXXXXXXXRAVSLSEDDEDXXXXXXXXXX 223
           + S++D WDFS FVR YA YLDERLEY+M                ++DE+          
Sbjct: 128 DNSKSDSWDFSAFVRTYALYLDERLEYKMQSRRGMRSMYGL----DEDEEEREREKEIIV 183

Query: 222 XXXXXREMKTDMIFVKMQH 166
                R+MK D IF KMQH
Sbjct: 184 RSTPVRDMKLDQIFSKMQH 202


>ref|XP_002874903.1| hypothetical protein ARALYDRAFT_911949 [Arabidopsis lyrata subsp.
           lyrata] gi|297320740|gb|EFH51162.1| hypothetical protein
           ARALYDRAFT_911949 [Arabidopsis lyrata subsp. lyrata]
          Length = 603

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = -2

Query: 402 EQSRADGWDFSTFVRAYARYLDERLEYRMHGXXXXXXXXRAVSLSEDDE---DXXXXXXX 232
           + S++D WD+S FVR YA YLDERL+YRM G           S  +DD            
Sbjct: 128 DASQSDSWDYSAFVRTYALYLDERLDYRMQGRRGKRSGGDGDSGEDDDHRETSTNIRSKA 187

Query: 231 XXXXXXXXREMKTDMIFVKMQH 166
                    EMKT+ IFV++QH
Sbjct: 188 FVVKSKTVTEMKTEKIFVRVQH 209


>ref|XP_002889433.1| hypothetical protein ARALYDRAFT_470282 [Arabidopsis lyrata subsp.
           lyrata] gi|297335275|gb|EFH65692.1| hypothetical protein
           ARALYDRAFT_470282 [Arabidopsis lyrata subsp. lyrata]
          Length = 599

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
 Frame = -2

Query: 396 SRADGWDFSTFVRAYARYLDERLEYRM---HGXXXXXXXXRAVSLSEDDEDXXXXXXXXX 226
           SR++ WD+S FVR YA YLDERL++RM   HG              E D+          
Sbjct: 130 SRSNSWDYSAFVRTYALYLDERLDFRMQARHGKRGVYCVGGEAEEGEQDQAAADLSTAIV 189

Query: 225 XXXXXXREMKTDMIFVKMQH 166
                  EMKT+ IF+++QH
Sbjct: 190 VRSQPIAEMKTEQIFIRIQH 209


>ref|NP_171804.1| putative clathrin assembly protein [Arabidopsis thaliana]
           gi|46396022|sp|Q9SA65.1|CAP4_ARATH RecName:
           Full=Putative clathrin assembly protein At1g03050
           gi|4587573|gb|AAD25804.1|AC006550_12 Similar to clathrin
           assembly protein gb|AF041374 (CALM) from Rattus
           norvegicus [Arabidopsis thaliana]
           gi|91805731|gb|ABE65594.1| clathrin assembly
           protein-like [Arabidopsis thaliana]
           gi|332189399|gb|AEE27520.1| putative clathrin assembly
           protein [Arabidopsis thaliana]
          Length = 599

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
 Frame = -2

Query: 396 SRADGWDFSTFVRAYARYLDERLEYRM---HGXXXXXXXXRAVSLSEDDEDXXXXXXXXX 226
           SR++ WD+S FVR YA YLDERL++RM   HG              E D+          
Sbjct: 130 SRSNSWDYSAFVRTYALYLDERLDFRMQARHGKRGVYCVGGEADEEEQDQAAADLSTAIV 189

Query: 225 XXXXXXREMKTDMIFVKMQH 166
                  EMKT+ IF+++QH
Sbjct: 190 VRSQPIAEMKTEQIFIRIQH 209


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