BLASTX nr result

ID: Dioscorea21_contig00035629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035629
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    83   2e-14
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...    80   1e-13
emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]    79   3e-13
emb|CAB78007.1| putative protein [Arabidopsis thaliana] gi|73210...    78   6e-13
emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   7e-12

>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/101 (38%), Positives = 56/101 (55%)
 Frame = -1

Query: 310 VRCESSDMQNRLLWDGPWTVAGRILQLAPWKESFQPAFERLTIAAVWIQLFHLPIELWTG 131
           +R E  D     L  GPW   G  L +  W   F P  + +T   +W++L ++P+ L+  
Sbjct: 96  IRFEREDEYLSALTGGPWRAFGSYLLVQAWSPEFDPLRDEITTTPIWVRLMNIPLSLYHT 155

Query: 130 EILEAIASQFGTVLKVDPHTLDKSRAKFARVCVELDLSKPL 8
            IL  IA   G  +KVD  TL   RA+FAR+C+E+DL+KPL
Sbjct: 156 SILMGIAGSLGKPVKVDMTTLHVERARFARMCIEVDLAKPL 196


>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/101 (40%), Positives = 56/101 (55%)
 Frame = -1

Query: 310 VRCESSDMQNRLLWDGPWTVAGRILQLAPWKESFQPAFERLTIAAVWIQLFHLPIELWTG 131
           VR E  +     L  GPW V G IL +  W   F P  + +    VW+++ +LP+  +  
Sbjct: 136 VRFEVEEDYMMALTGGPWRVLGSILMVQAWSPEFNPLRDVIETTPVWVRVANLPVTFYHN 195

Query: 130 EILEAIASQFGTVLKVDPHTLDKSRAKFARVCVELDLSKPL 8
           EIL  IA+  G  +KVD  TL K R +FARVCVE++L  PL
Sbjct: 196 EILLGIAAGLGKPIKVDLTTLRKERGRFARVCVEVNLKNPL 236


>emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]
          Length = 833

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/86 (41%), Positives = 54/86 (62%)
 Frame = -1

Query: 262 PWTVAGRILQLAPWKESFQPAFERLTIAAVWIQLFHLPIELWTGEILEAIASQFGTVLKV 83
           PW + G  + L PW  +F+P+   +T A VW++L  LPIE +  E+L  I +  G  +K+
Sbjct: 160 PWLIHGYYISLRPWVPNFKPSEATITHAKVWVRLPELPIEYYDKEVLLQIGAAIGRTIKI 219

Query: 82  DPHTLDKSRAKFARVCVELDLSKPLL 5
           DP T  ++R +FAR+CVE+DL   LL
Sbjct: 220 DPITEKQARGRFARMCVEVDLKHSLL 245


>emb|CAB78007.1| putative protein [Arabidopsis thaliana] gi|7321071|emb|CAB82118.1|
           putative protein [Arabidopsis thaliana]
          Length = 404

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/101 (36%), Positives = 58/101 (57%)
 Frame = -1

Query: 310 VRCESSDMQNRLLWDGPWTVAGRILQLAPWKESFQPAFERLTIAAVWIQLFHLPIELWTG 131
           +R E  +     L  GPW V G  L +  W  +F P  + +    VW++L ++P+  +  
Sbjct: 68  IRFELEEEYLAALTGGPWRVFGNYLMVQDWSPNFDPLRDDIVTTPVWVRLTNIPVNYYHR 127

Query: 130 EILEAIASQFGTVLKVDPHTLDKSRAKFARVCVELDLSKPL 8
            +LE IA   G +LKVD +T+   R +FARVC+E++L+KPL
Sbjct: 128 CLLEEIARGLGKLLKVDLNTITFGRGRFARVCIEVNLAKPL 168


>emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 744

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/97 (40%), Positives = 57/97 (58%)
 Frame = -1

Query: 295 SDMQNRLLWDGPWTVAGRILQLAPWKESFQPAFERLTIAAVWIQLFHLPIELWTGEILEA 116
           +DM+ + L+ GPW +    L L  WK  F+P+        VWI+   LP+E +  E L A
Sbjct: 172 NDME-KALFGGPWFILNHYLMLTRWKPDFRPSQSVFDKIMVWIRFPELPLEYYDKEALFA 230

Query: 115 IASQFGTVLKVDPHTLDKSRAKFARVCVELDLSKPLL 5
           IA + G  +KVD  T   +R ++ARVC+ELDL+K L+
Sbjct: 231 IAGKVGKPIKVDYATDHMARGRYARVCIELDLAKALV 267


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