BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035619
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   130   1e-28
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   124   8e-27
ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   110   9e-23
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   110   9e-23

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/102 (59%), Positives = 82/102 (80%)
 Frame = +1

Query: 61  KVSAKSAISLGDVILLPVSSEKSTNQTGGCSCSDDEINYIRSLELYKDSAMIVINKPPGM 240
           +V+AK  ++LGD ILLP++ E+  ++     C+D+EIN++ +LELYKD A+IV+NKPPG+
Sbjct: 143 RVAAKDLMNLGDQILLPITVEEFPSEKHEYHCNDEEINFVHNLELYKDPAIIVVNKPPGL 202

Query: 241 SVQGGVGIKYSLDTLATTSLKYNNPEPPRLVHRLDRDSSGVL 366
            VQGG+GIK SLD LA T L+Y+  EPPRLVHRLDRDSSG+L
Sbjct: 203 PVQGGIGIKRSLDELAATYLRYDCSEPPRLVHRLDRDSSGIL 244


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/102 (57%), Positives = 75/102 (73%)
 Frame = +1

Query: 61  KVSAKSAISLGDVILLPVSSEKSTNQTGGCSCSDDEINYIRSLELYKDSAMIVINKPPGM 240
           +V+AK  +++GD I LP+S +    +   C C + E N+IR LELYKD A+IV+NKPPGM
Sbjct: 204 RVAAKDLMNVGDRIFLPISVQALPFEKQKCHCGEKEANFIRGLELYKDEAIIVVNKPPGM 263

Query: 241 SVQGGVGIKYSLDTLATTSLKYNNPEPPRLVHRLDRDSSGVL 366
            VQGG+GIK S D LA + L Y+  EPPRLVHRLDRDSSG+L
Sbjct: 264 PVQGGIGIKSSFDELAASCLSYDYSEPPRLVHRLDRDSSGIL 305


>ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|222850284|gb|EEE87831.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/95 (56%), Positives = 71/95 (74%)
 Frame = +1

Query: 82  ISLGDVILLPVSSEKSTNQTGGCSCSDDEINYIRSLELYKDSAMIVINKPPGMSVQGGVG 261
           + +GD I LP+S +    +   C C+++EIN+IR LELYKD+A+IV+NKPPGM VQGG+G
Sbjct: 1   MDVGDRIFLPISVKVLPAEKQDCHCNEEEINFIRGLELYKDAAIIVVNKPPGMPVQGGIG 60

Query: 262 IKYSLDTLATTSLKYNNPEPPRLVHRLDRDSSGVL 366
           IK SLD L+ +    +  EPPRLVHRLDRD SG+L
Sbjct: 61  IKRSLDELSASCFSSDYSEPPRLVHRLDRDCSGIL 95


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/102 (51%), Positives = 74/102 (72%)
 Frame = +1

Query: 61  KVSAKSAISLGDVILLPVSSEKSTNQTGGCSCSDDEINYIRSLELYKDSAMIVINKPPGM 240
           +V+AK  +++GD I LP+S +  + +     C+ +E  ++ SL L+KD A++VINKPPG+
Sbjct: 144 RVAAKDILNVGDQIFLPMSVQVFSTEKTRDYCNKEEETFMHSLVLHKDPAILVINKPPGL 203

Query: 241 SVQGGVGIKYSLDTLATTSLKYNNPEPPRLVHRLDRDSSGVL 366
            VQGG+G+K SLD LA + L Y   EPPRLVHRLDRDSSG+L
Sbjct: 204 PVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGIL 245


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/102 (51%), Positives = 74/102 (72%)
 Frame = +1

Query: 61  KVSAKSAISLGDVILLPVSSEKSTNQTGGCSCSDDEINYIRSLELYKDSAMIVINKPPGM 240
           +V+AK  +++GD I LP+S +  + +     C+ +E  ++ SL L+KD A++VINKPPG+
Sbjct: 139 RVAAKDILNVGDQIFLPMSVQVFSTEKTRDYCNKEEETFMHSLVLHKDPAILVINKPPGL 198

Query: 241 SVQGGVGIKYSLDTLATTSLKYNNPEPPRLVHRLDRDSSGVL 366
            VQGG+G+K SLD LA + L Y   EPPRLVHRLDRDSSG+L
Sbjct: 199 PVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGIL 240