BLASTX nr result

ID: Dioscorea21_contig00035538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035538
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133769.1| PREDICTED: putative expansin-B2-like [Cucumi...    92   3e-17
gb|AAZ08315.1| putative beta-expansin [Eucalyptus globulus]            92   4e-17
ref|XP_002275557.1| PREDICTED: putative expansin-B2 [Vitis vinif...    92   6e-17
gb|EAY95094.1| hypothetical protein OsI_16909 [Oryza sativa Indi...    91   1e-16
ref|NP_001053501.2| Os04g0552000 [Oryza sativa Japonica Group] g...    91   1e-16

>ref|XP_004133769.1| PREDICTED: putative expansin-B2-like [Cucumis sativus]
           gi|449526511|ref|XP_004170257.1| PREDICTED: putative
           expansin-B2-like [Cucumis sativus]
          Length = 273

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/75 (61%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
 Frame = +1

Query: 4   AVELKQAPAKTSASDNWVHMDHSWGAVWKYNAGSDLRAPFSLRLTS-SSGKTLVVNNAIP 180
           +VELKQ       S++W+ M  SWGAVWK ++GS L+APFSLRLT+  SGKT+V NN IP
Sbjct: 198 SVELKQGAVD---SNSWIPMKQSWGAVWKLDSGSALQAPFSLRLTALDSGKTVVANNVIP 254

Query: 181 AGWQTQKTYRSLVNF 225
           AGWQ  K+YRS+VNF
Sbjct: 255 AGWQAGKSYRSVVNF 269


>gb|AAZ08315.1| putative beta-expansin [Eucalyptus globulus]
          Length = 210

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/76 (61%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
 Frame = +1

Query: 4   AVELKQAPAKTSASDNWVHMDHSWGAVWKYNAGSDLRAPFSLRLTS-SSGKTLVVNNAIP 180
           AV LKQA      SD+W+ M  SWGAVWK +    LRAPFS++LTS  SGKTLV NN IP
Sbjct: 138 AVNLKQA----LDSDSWLPMQQSWGAVWKLDGAGQLRAPFSIKLTSLDSGKTLVANNVIP 193

Query: 181 AGWQTQKTYRSLVNFS 228
           AGWQ  +TYRS+VNF+
Sbjct: 194 AGWQPGQTYRSVVNFA 209


>ref|XP_002275557.1| PREDICTED: putative expansin-B2 [Vitis vinifera]
           gi|297734541|emb|CBI16592.3| unnamed protein product
           [Vitis vinifera]
          Length = 273

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1   SAVELKQAPAKTSASDNWVHMDHSWGAVWKYNAGSDLRAPFSLRLTS-SSGKTLVVNNAI 177
           + V+L+QA      S++WV M  SWGAVWK ++GS LRAPFS+RLT+  SG TLV  N I
Sbjct: 200 AGVDLQQA----LHSNSWVPMQQSWGAVWKLDSGSGLRAPFSIRLTALESGNTLVAKNVI 255

Query: 178 PAGWQTQKTYRSLVNFS 228
           PAGWQ  KTYRSLVNF+
Sbjct: 256 PAGWQPGKTYRSLVNFN 272


>gb|EAY95094.1| hypothetical protein OsI_16909 [Oryza sativa Indica Group]
          Length = 264

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/75 (61%), Positives = 52/75 (69%)
 Frame = +1

Query: 1   SAVELKQAPAKTSASDNWVHMDHSWGAVWKYNAGSDLRAPFSLRLTSSSGKTLVVNNAIP 180
           S VEL Q    T A   W  M  SWGAVWK NAGS L+APFS+RLTSSSGKTLV +N IP
Sbjct: 194 SGVELMQ----TGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIP 249

Query: 181 AGWQTQKTYRSLVNF 225
           +GW+   +Y S VNF
Sbjct: 250 SGWKPGMSYISTVNF 264


>ref|NP_001053501.2| Os04g0552000 [Oryza sativa Japonica Group]
           gi|75144406|sp|Q7XT40.2|EXB15_ORYSJ RecName:
           Full=Expansin-B15; AltName: Full=Beta-expansin-15;
           AltName: Full=OsEXPB15; AltName: Full=OsaEXPb1.16;
           Flags: Precursor gi|21666630|gb|AAM73779.1|AF391108_1
           beta-expansin OsEXPB15 [Oryza sativa]
           gi|38345469|emb|CAE01687.2| OSJNBa0010H02.7 [Oryza
           sativa Japonica Group] gi|125591213|gb|EAZ31563.1|
           hypothetical protein OsJ_15706 [Oryza sativa Japonica
           Group] gi|255675667|dbj|BAF15415.2| Os04g0552000 [Oryza
           sativa Japonica Group]
          Length = 264

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/75 (61%), Positives = 52/75 (69%)
 Frame = +1

Query: 1   SAVELKQAPAKTSASDNWVHMDHSWGAVWKYNAGSDLRAPFSLRLTSSSGKTLVVNNAIP 180
           S VEL Q    T A   W  M  SWGAVWK NAGS L+APFS+RLTSSSGKTLV +N IP
Sbjct: 194 SGVELMQ----TGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIP 249

Query: 181 AGWQTQKTYRSLVNF 225
           +GW+   +Y S VNF
Sbjct: 250 SGWKPGMSYISTVNF 264


Top