BLASTX nr result

ID: Dioscorea21_contig00034998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034998
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315143.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
emb|CBI25442.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_002273218.1| PREDICTED: probable LRR receptor-like serine...   120   9e-26
ref|XP_002313236.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002312175.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>ref|XP_002315143.1| predicted protein [Populus trichocarpa] gi|222864183|gb|EEF01314.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/101 (59%), Positives = 72/101 (71%)
 Frame = -1

Query: 447 GRRPFSEDDGLLVRWASCYFNGRRPLKGMIDITLKSFKERDLGPLSELVNSCTSRDPRRR 268
           GR P+S D+  L  WAS Y  G +PLK MID TL SF E  L  + E++ SC  RDP+RR
Sbjct: 308 GRLPYSVDNVSLEDWASDYLRGYQPLKEMIDPTLDSFDEEKLERIGEVIQSCVHRDPKRR 367

Query: 267 PTMTEVTDSLRRITLISPEAAAPRLSPLWWAELEILSTEAN 145
           PTM  VT  LR IT ++P+AA P+LSPLWWAELEILSTEA+
Sbjct: 368 PTMRNVTARLREITALTPDAAIPKLSPLWWAELEILSTEAS 408


>emb|CBI25442.3| unnamed protein product [Vitis vinifera]
          Length = 670

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/101 (56%), Positives = 73/101 (72%)
 Frame = -1

Query: 447 GRRPFSEDDGLLVRWASCYFNGRRPLKGMIDITLKSFKERDLGPLSELVNSCTSRDPRRR 268
           GR P+S D+G L  WAS Y  G RP+K M+D TLK F+E  L  + E++ SC + DP++R
Sbjct: 570 GRVPYSVDNGSLEDWASNYLQGDRPIKEMVDPTLKFFQEEQLESIREVIKSCVNPDPKQR 629

Query: 267 PTMTEVTDSLRRITLISPEAAAPRLSPLWWAELEILSTEAN 145
           PTM +VT  +R IT I P+ A P+LSPLWWAELEILSTEA+
Sbjct: 630 PTMRDVTARMREITEIGPDGAIPKLSPLWWAELEILSTEAS 670


>ref|XP_002273218.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase MRH1-like [Vitis vinifera]
          Length = 654

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/101 (56%), Positives = 73/101 (72%)
 Frame = -1

Query: 447 GRRPFSEDDGLLVRWASCYFNGRRPLKGMIDITLKSFKERDLGPLSELVNSCTSRDPRRR 268
           GR P+S D+G L  WAS Y  G RP+K M+D TLK F+E  L  + E++ SC + DP++R
Sbjct: 554 GRVPYSVDNGSLEDWASNYLQGDRPIKEMVDPTLKFFQEEQLESIREVIKSCVNPDPKQR 613

Query: 267 PTMTEVTDSLRRITLISPEAAAPRLSPLWWAELEILSTEAN 145
           PTM +VT  +R IT I P+ A P+LSPLWWAELEILSTEA+
Sbjct: 614 PTMRDVTARMREITEIGPDGAIPKLSPLWWAELEILSTEAS 654


>ref|XP_002313236.1| predicted protein [Populus trichocarpa] gi|222849644|gb|EEE87191.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/101 (52%), Positives = 72/101 (71%)
 Frame = -1

Query: 447 GRRPFSEDDGLLVRWASCYFNGRRPLKGMIDITLKSFKERDLGPLSELVNSCTSRDPRRR 268
           GR P++ D+G L  WAS Y  G R LK ++D TLKSF+E +L  LSE++ +C   DP++R
Sbjct: 245 GRIPYAVDNGSLADWASDYLRGERSLKEIVDPTLKSFQENELEKLSEVIRNCIHPDPKQR 304

Query: 267 PTMTEVTDSLRRITLISPEAAAPRLSPLWWAELEILSTEAN 145
           PTM E+   L+ IT + P+ A P+LSPLWWAELEI+STE +
Sbjct: 305 PTMKEIASKLKEITAMEPDGATPKLSPLWWAELEIMSTEGS 345


>ref|XP_002312175.1| predicted protein [Populus trichocarpa] gi|222851995|gb|EEE89542.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/101 (55%), Positives = 72/101 (71%)
 Frame = -1

Query: 447 GRRPFSEDDGLLVRWASCYFNGRRPLKGMIDITLKSFKERDLGPLSELVNSCTSRDPRRR 268
           GR P+S D+  L  WAS Y  G +PL+  +D TL SF+E  L  + E++ SC   DP++R
Sbjct: 116 GRLPYSVDNVSLEDWASDYLRGYQPLREKVDPTLDSFEEEKLERIGEVIKSCVHPDPKQR 175

Query: 267 PTMTEVTDSLRRITLISPEAAAPRLSPLWWAELEILSTEAN 145
           PTM EVT  LR IT ++P+AA P+LSPLWWAELEILSTEA+
Sbjct: 176 PTMREVTGGLREITTLTPDAAIPKLSPLWWAELEILSTEAS 216


Top