BLASTX nr result

ID: Dioscorea21_contig00034979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034979
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    85   7e-15
ref|XP_003516382.1| PREDICTED: uncharacterized protein LOC100814...    81   8e-14
ref|XP_003541139.1| PREDICTED: uncharacterized protein LOC100788...    81   1e-13
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              80   1e-13
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              80   1e-13

>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 52/130 (40%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
 Frame = -3

Query: 389  LLNSTIFAIPNYILSVMNLPVGILDSISKMARGFLWGKSSNNSGFHSIGWTVTTLGKPEG 210
            L  S +  IP Y + +  LP  I DSI + AR FLW K SNN G H + W   T  K  G
Sbjct: 794  LATSVLSTIPTYYMQINWLPQNICDSIDQTARNFLW-KGSNNKGIHLVNWKTITRPKSIG 852

Query: 209  GLGIRNLRLAQHSLMAKNIFAILNSNDKLWVEIFKLKYSDWQIW---NPVKPKHTSWFFH 39
            GLGIR+ R A   L+ K ++ ++ S +KLWV +   KYS        N       SWF  
Sbjct: 853  GLGIRSARDANICLLGKLVWDMVQSTNKLWVNLLAKKYSSGTSLLEANVNSNSSPSWF-- 910

Query: 38   SICRSANFLK 9
            SI R+ + LK
Sbjct: 911  SIIRAKDILK 920


>ref|XP_003516382.1| PREDICTED: uncharacterized protein LOC100814421 [Glycine max]
          Length = 379

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
 Frame = -3

Query: 389 LLNSTIFAIPNYILSVMNLPVGILDSISKMARGFLWGKSSNNSGFHSIGWTVTTLGKPEG 210
           L+NS + A+P Y+LS   +P  +++ + K+ R FLWG   +N     + W +  L K EG
Sbjct: 209 LINSVLNALPIYLLSFFKIPQKVINRLVKLERNFLWGGDQDNKKIPWVKWDIVCLPKCEG 268

Query: 209 GLGIRNLRLAQHSLMAKNIFAILNSNDKLWVEIFKLKYSDWQIWNPVKP--KHTSWF 45
            LGI+++     +L+ K I+A+ + + +LWV I   KY  W+     +   +H+ W+
Sbjct: 269 DLGIKDIAKFNTALLGKWIWALASDHQQLWVRIINSKYGGWEALQSARAQGRHSGWW 325


>ref|XP_003541139.1| PREDICTED: uncharacterized protein LOC100788661 [Glycine max]
          Length = 372

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
 Frame = -3

Query: 389 LLNSTIFAIPNYILSVMNLPVGILDSISKMARGFLWGKSSNNSGFHSIGWTVTTLGKPEG 210
           L+NS + A+P Y+LS   +P  +++ + K+ R FLWG   +N     + W +  L   EG
Sbjct: 241 LINSVVNALPIYLLSFFKIPQKVINRLVKLQRNFLWGGDQDNKKIPWVKWDIVCLPNCEG 300

Query: 209 GLGIRNLRLAQHSLMAKNIFAILNSNDKLWVEIFKLKYSDWQIWNPVKP--KHTSWF 45
           GLGI+++     +L+ K I+AI + + +LWV I   KY  W+     +   +++ W+
Sbjct: 301 GLGIKDIAKFNTTLLGKWIWAIASDHQQLWVRIINSKYGGWEALQSARAQGRYSGWW 357


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
 Frame = -3

Query: 392  ILLNSTIFAIPNYILSVMNLPVGILDSISKMARGFLWGKSSNNSGFHSIGWTVTTLGKPE 213
            +L+ +++  +P Y + VM LPV   + I K  R FLWG  +N    HS+ W      + E
Sbjct: 1327 VLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNE 1386

Query: 212  GGLGIRNLRLAQHSLMAKNIFAILNSNDKLWVEIFKLKY-SDWQIWNPVKPKHTSWFFHS 36
            GGLG+R  R    + + K  + I ++ DKLWV++ + KY  +    +     + SW + S
Sbjct: 1387 GGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRS 1446

Query: 35   ICRSANFL 12
            I +  + L
Sbjct: 1447 IMKGKDVL 1454


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
 Frame = -3

Query: 392  ILLNSTIFAIPNYILSVMNLPVGILDSISKMARGFLWGKSSNNSGFHSIGWTVTTLGKPE 213
            +L+ +++  +P Y + VM LPV   + I K  R FLWG  +N    HS+ W      + E
Sbjct: 795  VLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNE 854

Query: 212  GGLGIRNLRLAQHSLMAKNIFAILNSNDKLWVEIFKLKY-SDWQIWNPVKPKHTSWFFHS 36
            GGLG+R  R    + + K  + I ++ DKLWV++ + KY  +    +     + SW + S
Sbjct: 855  GGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRS 914

Query: 35   ICRSANFL 12
            I +  + L
Sbjct: 915  IMKGKDVL 922


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