BLASTX nr result

ID: Dioscorea21_contig00034948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034948
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]        96   2e-18
gb|EEE60251.1| hypothetical protein OsJ_13260 [Oryza sativa Japo...    94   1e-17
gb|EEC76472.1| hypothetical protein OsI_14206 [Oryza sativa Indi...    94   1e-17
ref|XP_002467247.1| hypothetical protein SORBIDRAFT_01g022000 [S...    91   1e-16
gb|EEE58977.1| hypothetical protein OsJ_10678 [Oryza sativa Japo...    90   2e-16

>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
          Length = 1096

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 51/152 (33%), Positives = 83/152 (54%)
 Frame = +1

Query: 1   VRAKCAAKGCKWLVFCSWCSGKKMYVVKSYV*EHSCLVGTSKNRRVTGNVVAKRFFDVIS 180
           VR KC  K CKWL++ S       ++VK+Y   H C   T+KN+  T N +A +F D I 
Sbjct: 352 VRVKCQHKKCKWLLYASLDKDSGDFIVKNYYPVHQCPT-TTKNKLCTSNFIANKFRDRIV 410

Query: 181 GMPFIRPRHLKTMVRKELGVFISSKVCRNAKALVQKKIEKQYKEDFLVLNNYAMELKQSN 360
             P+I+   ++ +VRK  G+++   +C  AK ++ K+    +K +F  L +YA  +KQ+N
Sbjct: 411 SQPYIKLWEIQELVRKTTGLYVGRTLCYRAKLMILKEFMGDWKMEFARLCDYADMIKQTN 470

Query: 361 PGSNINVVTKREVGLEFPVFQRIYICLTPIRK 456
           PGS+  V T  E      +F   Y+C   +++
Sbjct: 471 PGSSCWVRTDMESTPGKNMFVYFYVCFDALKR 502


>gb|EEE60251.1| hypothetical protein OsJ_13260 [Oryza sativa Japonica Group]
          Length = 974

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/152 (34%), Positives = 86/152 (56%)
 Frame = +1

Query: 1   VRAKCAAKGCKWLVFCSWCSGKKMYVVKSYV*EHSCLVGTSKNRRVTGNVVAKRFFDVIS 180
           +RA C  KGC WL+  S+ S    + + +Y   HSC     KN+R++ + +  ++  VI 
Sbjct: 221 LRAVCMRKGCTWLLHASYNSRSDWFQIVTYNGNHSCCPDL-KNKRLSTSRICDKYESVIK 279

Query: 181 GMPFIRPRHLKTMVRKELGVFISSKVCRNAKALVQKKIEKQYKEDFLVLNNYAMELKQSN 360
             P  + R LK  V++E+GV +S  + + AK+ V KK+   +  ++  L +YA+EL +SN
Sbjct: 280 ANPSWKARELKETVQEEMGVDVSMTMVKRAKSRVIKKVMDAHSGEYSRLFDYALELMRSN 339

Query: 361 PGSNINVVTKREVGLEFPVFQRIYICLTPIRK 456
           PGS+++V    +      VFQR Y+CL   R+
Sbjct: 340 PGSSVHVALDPDENEH--VFQRFYVCLDACRR 369


>gb|EEC76472.1| hypothetical protein OsI_14206 [Oryza sativa Indica Group]
          Length = 1029

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/152 (34%), Positives = 86/152 (56%)
 Frame = +1

Query: 1   VRAKCAAKGCKWLVFCSWCSGKKMYVVKSYV*EHSCLVGTSKNRRVTGNVVAKRFFDVIS 180
           +RA C  KGC WL+  S+ S    + + +Y   HSC     KN+R++ + +  ++  VI 
Sbjct: 276 LRAVCMRKGCTWLLHASYNSRSDWFQIVTYNGNHSCCPDL-KNKRLSTSRICDKYESVIK 334

Query: 181 GMPFIRPRHLKTMVRKELGVFISSKVCRNAKALVQKKIEKQYKEDFLVLNNYAMELKQSN 360
             P  + R LK  V++E+GV +S  + + AK+ V KK+   +  ++  L +YA+EL +SN
Sbjct: 335 ANPSWKARELKETVQEEMGVDVSMTMVKRAKSRVIKKVMDAHSGEYSRLFDYALELMRSN 394

Query: 361 PGSNINVVTKREVGLEFPVFQRIYICLTPIRK 456
           PGS+++V    +      VFQR Y+CL   R+
Sbjct: 395 PGSSVHVALDPDENEH--VFQRFYVCLDACRR 424


>ref|XP_002467247.1| hypothetical protein SORBIDRAFT_01g022000 [Sorghum bicolor]
           gi|241921101|gb|EER94245.1| hypothetical protein
           SORBIDRAFT_01g022000 [Sorghum bicolor]
          Length = 455

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 49/152 (32%), Positives = 85/152 (55%)
 Frame = +1

Query: 1   VRAKCAAKGCKWLVFCSWCSGKKMYVVKSYV*EHSCLVGTSKNRRVTGNVVAKRFFDVIS 180
           +RAKC+ KGC W++F S  S    + +KSY  EH C      N+ VTG  +A+++  +I 
Sbjct: 293 IRAKCSWKGCPWVIFGSSKSNDDRFQIKSYTDEHVC-PKRKDNKLVTGPRIAEKYEHIIK 351

Query: 181 GMPFIRPRHLKTMVRKELGVFISSKVCRNAKALVQKKIEKQYKEDFLVLNNYAMELKQSN 360
             P  + +++K  V  ++GV +S    + AK++V +++ +  K ++  +  Y  E+ +SN
Sbjct: 352 ANPSWKLQNIKETVLIDMGVDVSMSNVKRAKSIVMRRVYESCKGEYAKIFEYQAEIVRSN 411

Query: 361 PGSNINVVTKREVGLEFPVFQRIYICLTPIRK 456
            GS + +    +   + PVFQRIYIC    +K
Sbjct: 412 LGSTVAICL--DPDYDQPVFQRIYICFDACKK 441


>gb|EEE58977.1| hypothetical protein OsJ_10678 [Oryza sativa Japonica Group]
          Length = 785

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 52/144 (36%), Positives = 82/144 (56%)
 Frame = +1

Query: 1   VRAKCAAKGCKWLVFCSWCSGKKMYVVKSYV*EHSCLVGTSKNRRVTGNVVAKRFFDVIS 180
           VRA C+  GCKWL++ S  S  + + V S+  EH C      N+ VT  ++A ++FDVI 
Sbjct: 327 VRATCSWPGCKWLIYGSKTSKSEWFQVASFNNEHCC-PPRRDNKLVTSRIIANKYFDVIK 385

Query: 181 GMPFIRPRHLKTMVRKELGVFISSKVCRNAKALVQKKIEKQYKEDFLVLNNYAMELKQSN 360
             P  +  H+K  V K++   +S   C+ AKALV ++   + + ++  + +Y +EL +SN
Sbjct: 386 DNPTWKVEHIKKSVLKDMLADVSISKCKRAKALVLQEALDKTRGEYSRVYDYQLELLRSN 445

Query: 361 PGSNINVVTKREVGLEFPVFQRIY 432
           PGS + VVT     L+  VF+R Y
Sbjct: 446 PGSTV-VVTLNPDILDKKVFERFY 468


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