BLASTX nr result
ID: Dioscorea21_contig00034920
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00034920 (275 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li... 140 1e-31 emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera] 140 1e-31 ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arab... 139 2e-31 gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana] 135 3e-30 ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabido... 135 3e-30 >ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera] Length = 1255 Score = 140 bits (353), Expect = 1e-31 Identities = 70/90 (77%), Positives = 75/90 (83%) Frame = +1 Query: 4 TLSSMGSCTSELGVQFESCLEAPHVIDINSQLWAAVISCGPGNYQLNASYKTASAYGFQD 183 TLS M S +SELGVQF +CLEAPHVIDI SQLWAA+ S PGNY LNASYKTA AY FQD Sbjct: 480 TLSPMHSFSSELGVQFGTCLEAPHVIDIESQLWAAIFSTSPGNYPLNASYKTADAYAFQD 539 Query: 184 ALGASLEGICEIVPGGVLVFFPSYKLLEKL 273 ALG SLE I +IVPGG LVFFPSYKL+EKL Sbjct: 540 ALGKSLEEIFKIVPGGTLVFFPSYKLMEKL 569 >emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera] Length = 1261 Score = 140 bits (353), Expect = 1e-31 Identities = 70/90 (77%), Positives = 75/90 (83%) Frame = +1 Query: 4 TLSSMGSCTSELGVQFESCLEAPHVIDINSQLWAAVISCGPGNYQLNASYKTASAYGFQD 183 TLS M S +SELGVQF +CLEAPHVIDI SQLWAA+ S PGNY LNASYKTA AY FQD Sbjct: 418 TLSPMHSFSSELGVQFGTCLEAPHVIDIESQLWAAIFSTSPGNYPLNASYKTADAYAFQD 477 Query: 184 ALGASLEGICEIVPGGVLVFFPSYKLLEKL 273 ALG SLE I +IVPGG LVFFPSYKL+EKL Sbjct: 478 ALGKSLEEIFKIVPGGTLVFFPSYKLMEKL 507 >ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp. lyrata] gi|297338970|gb|EFH69387.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp. lyrata] Length = 1138 Score = 139 bits (350), Expect = 2e-31 Identities = 68/90 (75%), Positives = 74/90 (82%) Frame = +1 Query: 4 TLSSMGSCTSELGVQFESCLEAPHVIDINSQLWAAVISCGPGNYQLNASYKTASAYGFQD 183 TLS M S +SELG+QF +CLEAPHVID N Q+WA IS GPGN+ LNASYKTA AY FQD Sbjct: 464 TLSPMNSFSSELGMQFGTCLEAPHVIDPNMQVWAGAISSGPGNFPLNASYKTADAYAFQD 523 Query: 184 ALGASLEGICEIVPGGVLVFFPSYKLLEKL 273 ALG SLE IC IVPGG LVFFPSYKL+EKL Sbjct: 524 ALGKSLEEICSIVPGGSLVFFPSYKLMEKL 553 >gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana] Length = 1119 Score = 135 bits (341), Expect = 3e-30 Identities = 67/90 (74%), Positives = 73/90 (81%) Frame = +1 Query: 4 TLSSMGSCTSELGVQFESCLEAPHVIDINSQLWAAVISCGPGNYQLNASYKTASAYGFQD 183 TLS M S +SELG+QF +CLEAPHVID N Q+WA IS PGNY LNASY+TA AY FQD Sbjct: 411 TLSPMNSFSSELGMQFGTCLEAPHVIDPNMQVWAGAISTVPGNYPLNASYRTAEAYAFQD 470 Query: 184 ALGASLEGICEIVPGGVLVFFPSYKLLEKL 273 ALG SLE IC IVPGG LVFFPSYKL+EKL Sbjct: 471 ALGKSLEEICTIVPGGSLVFFPSYKLMEKL 500 >ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana] gi|332191897|gb|AEE30018.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana] Length = 1144 Score = 135 bits (341), Expect = 3e-30 Identities = 67/90 (74%), Positives = 73/90 (81%) Frame = +1 Query: 4 TLSSMGSCTSELGVQFESCLEAPHVIDINSQLWAAVISCGPGNYQLNASYKTASAYGFQD 183 TLS M S +SELG+QF +CLEAPHVID N Q+WA IS PGNY LNASY+TA AY FQD Sbjct: 427 TLSPMNSFSSELGMQFGTCLEAPHVIDPNMQVWAGAISTVPGNYPLNASYRTAEAYAFQD 486 Query: 184 ALGASLEGICEIVPGGVLVFFPSYKLLEKL 273 ALG SLE IC IVPGG LVFFPSYKL+EKL Sbjct: 487 ALGKSLEEICTIVPGGSLVFFPSYKLMEKL 516