BLASTX nr result

ID: Dioscorea21_contig00034920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034920
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...   140   1e-31
emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]   140   1e-31
ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arab...   139   2e-31
gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana]             135   3e-30
ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabido...   135   3e-30

>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score =  140 bits (353), Expect = 1e-31
 Identities = 70/90 (77%), Positives = 75/90 (83%)
 Frame = +1

Query: 4   TLSSMGSCTSELGVQFESCLEAPHVIDINSQLWAAVISCGPGNYQLNASYKTASAYGFQD 183
           TLS M S +SELGVQF +CLEAPHVIDI SQLWAA+ S  PGNY LNASYKTA AY FQD
Sbjct: 480 TLSPMHSFSSELGVQFGTCLEAPHVIDIESQLWAAIFSTSPGNYPLNASYKTADAYAFQD 539

Query: 184 ALGASLEGICEIVPGGVLVFFPSYKLLEKL 273
           ALG SLE I +IVPGG LVFFPSYKL+EKL
Sbjct: 540 ALGKSLEEIFKIVPGGTLVFFPSYKLMEKL 569


>emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
          Length = 1261

 Score =  140 bits (353), Expect = 1e-31
 Identities = 70/90 (77%), Positives = 75/90 (83%)
 Frame = +1

Query: 4   TLSSMGSCTSELGVQFESCLEAPHVIDINSQLWAAVISCGPGNYQLNASYKTASAYGFQD 183
           TLS M S +SELGVQF +CLEAPHVIDI SQLWAA+ S  PGNY LNASYKTA AY FQD
Sbjct: 418 TLSPMHSFSSELGVQFGTCLEAPHVIDIESQLWAAIFSTSPGNYPLNASYKTADAYAFQD 477

Query: 184 ALGASLEGICEIVPGGVLVFFPSYKLLEKL 273
           ALG SLE I +IVPGG LVFFPSYKL+EKL
Sbjct: 478 ALGKSLEEIFKIVPGGTLVFFPSYKLMEKL 507


>ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
           lyrata] gi|297338970|gb|EFH69387.1| hypothetical protein
           ARALYDRAFT_472311 [Arabidopsis lyrata subsp. lyrata]
          Length = 1138

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/90 (75%), Positives = 74/90 (82%)
 Frame = +1

Query: 4   TLSSMGSCTSELGVQFESCLEAPHVIDINSQLWAAVISCGPGNYQLNASYKTASAYGFQD 183
           TLS M S +SELG+QF +CLEAPHVID N Q+WA  IS GPGN+ LNASYKTA AY FQD
Sbjct: 464 TLSPMNSFSSELGMQFGTCLEAPHVIDPNMQVWAGAISSGPGNFPLNASYKTADAYAFQD 523

Query: 184 ALGASLEGICEIVPGGVLVFFPSYKLLEKL 273
           ALG SLE IC IVPGG LVFFPSYKL+EKL
Sbjct: 524 ALGKSLEEICSIVPGGSLVFFPSYKLMEKL 553


>gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana]
          Length = 1119

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/90 (74%), Positives = 73/90 (81%)
 Frame = +1

Query: 4   TLSSMGSCTSELGVQFESCLEAPHVIDINSQLWAAVISCGPGNYQLNASYKTASAYGFQD 183
           TLS M S +SELG+QF +CLEAPHVID N Q+WA  IS  PGNY LNASY+TA AY FQD
Sbjct: 411 TLSPMNSFSSELGMQFGTCLEAPHVIDPNMQVWAGAISTVPGNYPLNASYRTAEAYAFQD 470

Query: 184 ALGASLEGICEIVPGGVLVFFPSYKLLEKL 273
           ALG SLE IC IVPGG LVFFPSYKL+EKL
Sbjct: 471 ALGKSLEEICTIVPGGSLVFFPSYKLMEKL 500


>ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
           gi|332191897|gb|AEE30018.1| RAD3-like DNA-binding
           helicase protein [Arabidopsis thaliana]
          Length = 1144

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/90 (74%), Positives = 73/90 (81%)
 Frame = +1

Query: 4   TLSSMGSCTSELGVQFESCLEAPHVIDINSQLWAAVISCGPGNYQLNASYKTASAYGFQD 183
           TLS M S +SELG+QF +CLEAPHVID N Q+WA  IS  PGNY LNASY+TA AY FQD
Sbjct: 427 TLSPMNSFSSELGMQFGTCLEAPHVIDPNMQVWAGAISTVPGNYPLNASYRTAEAYAFQD 486

Query: 184 ALGASLEGICEIVPGGVLVFFPSYKLLEKL 273
           ALG SLE IC IVPGG LVFFPSYKL+EKL
Sbjct: 487 ALGKSLEEICTIVPGGSLVFFPSYKLMEKL 516


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