BLASTX nr result

ID: Dioscorea21_contig00034911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034911
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japo...   109   2e-22
ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis ...   105   5e-21
tpg|DAA64140.1| TPA: hypothetical protein ZEAMMB73_955502 [Zea m...   103   1e-20
ref|NP_181609.4| RING-finger, DEAD-like helicase, PHD and SNF2 d...   103   2e-20
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   100   9e-20

>gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japonica Group]
          Length = 1663

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/88 (59%), Positives = 65/88 (73%)
 Frame = +2

Query: 5   KKNATDVIEMAGNYTCVLCSELFEAANSNISTGATLIVCPAPILAQWFSEVMRHTRPGSL 184
           KK+   + E    Y C LC EL EAA +NIS+ ATLIVCP+PILAQW SE++RHTRPGSL
Sbjct: 471 KKDRYCIAETEEKYICTLCLELIEAAQTNISSNATLIVCPSPILAQWHSEIIRHTRPGSL 530

Query: 185 KVSIYDGAKNAASSATLMTDMCELAAAD 268
           KV IY+GAKN   ++T  +DM E++ AD
Sbjct: 531 KVCIYEGAKNTDLTSTQKSDMAEISTAD 558


>ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327578|gb|EFH57998.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1635

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/89 (57%), Positives = 63/89 (70%)
 Frame = +2

Query: 2   NKKNATDVIEMAGNYTCVLCSELFEAANSNISTGATLIVCPAPILAQWFSEVMRHTRPGS 181
           +KK+AT++I+  G Y C +CSEL +   S ISTGATLIVCPAPIL QW SE+ RHTR GS
Sbjct: 451 SKKDATEIIDREGEYICQMCSELLQVTASPISTGATLIVCPAPILPQWHSEITRHTRLGS 510

Query: 182 LKVSIYDGAKNAASSATLMTDMCELAAAD 268
           L   IY+G +NA+ S   M D+ EL  AD
Sbjct: 511 LVTCIYEGVRNASLSEEPMIDITELLNAD 539


>tpg|DAA64140.1| TPA: hypothetical protein ZEAMMB73_955502 [Zea mays]
          Length = 597

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/88 (56%), Positives = 58/88 (65%)
 Frame = +2

Query: 5   KKNATDVIEMAGNYTCVLCSELFEAANSNISTGATLIVCPAPILAQWFSEVMRHTRPGSL 184
           KK    ++E    Y C LC EL EA  +NI + ATLIVCPAPILAQW SE+ RHTRPGSL
Sbjct: 464 KKPRCSIVETEDKYICALCLELIEATQTNILSHATLIVCPAPILAQWHSEITRHTRPGSL 523

Query: 185 KVSIYDGAKNAASSATLMTDMCELAAAD 268
           KV IY+GA+N   S     DM E+  AD
Sbjct: 524 KVCIYEGARNLDPSTIQKNDMTEIITAD 551


>ref|NP_181609.4| RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing
           protein [Arabidopsis thaliana]
           gi|330254782|gb|AEC09876.1| RING-finger, DEAD-like
           helicase, PHD and SNF2 domain-containing protein
           [Arabidopsis thaliana]
          Length = 1664

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/89 (57%), Positives = 62/89 (69%)
 Frame = +2

Query: 2   NKKNATDVIEMAGNYTCVLCSELFEAANSNISTGATLIVCPAPILAQWFSEVMRHTRPGS 181
           +KK+AT++I   G Y C +CSEL +   S ISTGATLIVCPAPIL QW SE+ RHTR GS
Sbjct: 467 SKKDATEIIVREGEYICQMCSELLQVTASPISTGATLIVCPAPILPQWHSEITRHTRLGS 526

Query: 182 LKVSIYDGAKNAASSATLMTDMCELAAAD 268
           L   IY+G +NA+ S   M D+ EL  AD
Sbjct: 527 LITCIYEGVRNASLSEEPMIDITELLNAD 555


>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  100 bits (250), Expect = 9e-20
 Identities = 45/88 (51%), Positives = 63/88 (71%)
 Frame = +2

Query: 5   KKNATDVIEMAGNYTCVLCSELFEAANSNISTGATLIVCPAPILAQWFSEVMRHTRPGSL 184
           KKN T+++ M G + C LC EL +A +S  +TGATLIVCPAPIL QW +E++RHT PGSL
Sbjct: 472 KKNKTNIVLMDGEHICQLCLELIQATDSPAATGATLIVCPAPILPQWHAEIIRHTNPGSL 531

Query: 185 KVSIYDGAKNAASSATLMTDMCELAAAD 268
           K+ +Y+G +N + S     D+ +L +AD
Sbjct: 532 KLCVYEGVRNTSLSNAYAMDISKLISAD 559


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