BLASTX nr result
ID: Dioscorea21_contig00034911
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00034911 (270 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japo... 109 2e-22 ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis ... 105 5e-21 tpg|DAA64140.1| TPA: hypothetical protein ZEAMMB73_955502 [Zea m... 103 1e-20 ref|NP_181609.4| RING-finger, DEAD-like helicase, PHD and SNF2 d... 103 2e-20 ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 100 9e-20 >gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japonica Group] Length = 1663 Score = 109 bits (273), Expect = 2e-22 Identities = 52/88 (59%), Positives = 65/88 (73%) Frame = +2 Query: 5 KKNATDVIEMAGNYTCVLCSELFEAANSNISTGATLIVCPAPILAQWFSEVMRHTRPGSL 184 KK+ + E Y C LC EL EAA +NIS+ ATLIVCP+PILAQW SE++RHTRPGSL Sbjct: 471 KKDRYCIAETEEKYICTLCLELIEAAQTNISSNATLIVCPSPILAQWHSEIIRHTRPGSL 530 Query: 185 KVSIYDGAKNAASSATLMTDMCELAAAD 268 KV IY+GAKN ++T +DM E++ AD Sbjct: 531 KVCIYEGAKNTDLTSTQKSDMAEISTAD 558 >ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297327578|gb|EFH57998.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1635 Score = 105 bits (261), Expect = 5e-21 Identities = 51/89 (57%), Positives = 63/89 (70%) Frame = +2 Query: 2 NKKNATDVIEMAGNYTCVLCSELFEAANSNISTGATLIVCPAPILAQWFSEVMRHTRPGS 181 +KK+AT++I+ G Y C +CSEL + S ISTGATLIVCPAPIL QW SE+ RHTR GS Sbjct: 451 SKKDATEIIDREGEYICQMCSELLQVTASPISTGATLIVCPAPILPQWHSEITRHTRLGS 510 Query: 182 LKVSIYDGAKNAASSATLMTDMCELAAAD 268 L IY+G +NA+ S M D+ EL AD Sbjct: 511 LVTCIYEGVRNASLSEEPMIDITELLNAD 539 >tpg|DAA64140.1| TPA: hypothetical protein ZEAMMB73_955502 [Zea mays] Length = 597 Score = 103 bits (257), Expect = 1e-20 Identities = 50/88 (56%), Positives = 58/88 (65%) Frame = +2 Query: 5 KKNATDVIEMAGNYTCVLCSELFEAANSNISTGATLIVCPAPILAQWFSEVMRHTRPGSL 184 KK ++E Y C LC EL EA +NI + ATLIVCPAPILAQW SE+ RHTRPGSL Sbjct: 464 KKPRCSIVETEDKYICALCLELIEATQTNILSHATLIVCPAPILAQWHSEITRHTRPGSL 523 Query: 185 KVSIYDGAKNAASSATLMTDMCELAAAD 268 KV IY+GA+N S DM E+ AD Sbjct: 524 KVCIYEGARNLDPSTIQKNDMTEIITAD 551 >ref|NP_181609.4| RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [Arabidopsis thaliana] gi|330254782|gb|AEC09876.1| RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [Arabidopsis thaliana] Length = 1664 Score = 103 bits (256), Expect = 2e-20 Identities = 51/89 (57%), Positives = 62/89 (69%) Frame = +2 Query: 2 NKKNATDVIEMAGNYTCVLCSELFEAANSNISTGATLIVCPAPILAQWFSEVMRHTRPGS 181 +KK+AT++I G Y C +CSEL + S ISTGATLIVCPAPIL QW SE+ RHTR GS Sbjct: 467 SKKDATEIIVREGEYICQMCSELLQVTASPISTGATLIVCPAPILPQWHSEITRHTRLGS 526 Query: 182 LKVSIYDGAKNAASSATLMTDMCELAAAD 268 L IY+G +NA+ S M D+ EL AD Sbjct: 527 LITCIYEGVRNASLSEEPMIDITELLNAD 555 >ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera] Length = 1704 Score = 100 bits (250), Expect = 9e-20 Identities = 45/88 (51%), Positives = 63/88 (71%) Frame = +2 Query: 5 KKNATDVIEMAGNYTCVLCSELFEAANSNISTGATLIVCPAPILAQWFSEVMRHTRPGSL 184 KKN T+++ M G + C LC EL +A +S +TGATLIVCPAPIL QW +E++RHT PGSL Sbjct: 472 KKNKTNIVLMDGEHICQLCLELIQATDSPAATGATLIVCPAPILPQWHAEIIRHTNPGSL 531 Query: 185 KVSIYDGAKNAASSATLMTDMCELAAAD 268 K+ +Y+G +N + S D+ +L +AD Sbjct: 532 KLCVYEGVRNTSLSNAYAMDISKLISAD 559