BLASTX nr result

ID: Dioscorea21_contig00034883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034883
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD41078.1|AF141204_1 Nramp2 [Arabidopsis thaliana]                127   1e-27
ref|XP_002894035.1| NRAMP2 [Arabidopsis lyrata subsp. lyrata] gi...   127   1e-27
ref|NP_175157.1| metal transporter Nramp2 [Arabidopsis thaliana]...   127   1e-27
ref|XP_002443431.1| hypothetical protein SORBIDRAFT_08g019400 [S...   122   4e-26
tpg|DAA47240.1| TPA: hypothetical protein ZEAMMB73_011944 [Zea m...   121   7e-26

>gb|AAD41078.1|AF141204_1 Nramp2 [Arabidopsis thaliana]
          Length = 530

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/102 (65%), Positives = 74/102 (72%), Gaps = 8/102 (7%)
 Frame = -1

Query: 284 QESDTLLP----GRSIGDDNSSREKTFEAGEKIAIPVSDEDPD----GDSVPSFSWRKLW 129
           +E D LLP     +S+   +S  E  FE  EKI I V  E PD    GD+ P FSWRKLW
Sbjct: 11  EEEDRLLPPPPPSQSLPSTDSESEAAFETNEKILI-VDFESPDDPTTGDTPPPFSWRKLW 69

Query: 128 LFMGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLLWATA 3
           LF GPGFLMSIAFLDPGNLEGDLQAGA+AGYSLLWLL+WATA
Sbjct: 70  LFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATA 111


>ref|XP_002894035.1| NRAMP2 [Arabidopsis lyrata subsp. lyrata]
           gi|297339877|gb|EFH70294.1| NRAMP2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 532

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/101 (66%), Positives = 76/101 (75%), Gaps = 7/101 (6%)
 Frame = -1

Query: 284 QESDTLLPG---RSIGDDNSSREKTFEAGEKIAIPVSDEDPD----GDSVPSFSWRKLWL 126
           +E++ LLP    +S+   +S  E  FE+ EKI I V  E PD    GDS P FSWRKLWL
Sbjct: 14  EEANRLLPPPHPQSLPSSDSESEAAFESNEKILI-VDFESPDDPTTGDSPPPFSWRKLWL 72

Query: 125 FMGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLLWATA 3
           F GPGFLMSIAFLDPGNLEGDLQAGA+AGYSLLWLL+WATA
Sbjct: 73  FTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATA 113


>ref|NP_175157.1| metal transporter Nramp2 [Arabidopsis thaliana]
           gi|29839611|sp|Q9C6B2.1|NRAM2_ARATH RecName: Full=Metal
           transporter Nramp2; Short=AtNramp2
           gi|12325401|gb|AAG52643.1|AC079677_7 stress response
           protein Nramp2; 19015-21280 [Arabidopsis thaliana]
           gi|15294258|gb|AAK95306.1|AF410320_1 At1g47240/F8G22_4
           [Arabidopsis thaliana] gi|20857010|gb|AAM26695.1|
           At1g47240/F8G22_4 [Arabidopsis thaliana]
           gi|332194021|gb|AEE32142.1| metal transporter Nramp2
           [Arabidopsis thaliana]
          Length = 530

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/102 (65%), Positives = 74/102 (72%), Gaps = 8/102 (7%)
 Frame = -1

Query: 284 QESDTLLP----GRSIGDDNSSREKTFEAGEKIAIPVSDEDPD----GDSVPSFSWRKLW 129
           +E D LLP     +S+   +S  E  FE  EKI I V  E PD    GD+ P FSWRKLW
Sbjct: 11  EEEDRLLPPPPPSQSLPSTDSESEAAFETNEKILI-VDFESPDDPTTGDTPPPFSWRKLW 69

Query: 128 LFMGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLLWATA 3
           LF GPGFLMSIAFLDPGNLEGDLQAGA+AGYSLLWLL+WATA
Sbjct: 70  LFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATA 111


>ref|XP_002443431.1| hypothetical protein SORBIDRAFT_08g019400 [Sorghum bicolor]
           gi|241944124|gb|EES17269.1| hypothetical protein
           SORBIDRAFT_08g019400 [Sorghum bicolor]
          Length = 544

 Score =  122 bits (305), Expect = 4e-26
 Identities = 66/116 (56%), Positives = 76/116 (65%), Gaps = 20/116 (17%)
 Frame = -1

Query: 290 AVQESDTLLPGRSIG-----DDNSSREKTFEAGEKIAIPVSD----EDPDGD-------- 162
           AV+E+  LLP  +       DD    E+ +EA EK+ + +SD     D DGD        
Sbjct: 17  AVEEARALLPASAPAPDYDDDDEDLEERAYEAAEKVIVSISDGPDPADGDGDDDAAFCSS 76

Query: 161 ---SVPSFSWRKLWLFMGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLLWATA 3
              S P FSWRKLWLF GPGFLMSIAFLDPGNLEGDLQAGAVAG +LLWLL+WATA
Sbjct: 77  SGSSTPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGDTLLWLLMWATA 132


>tpg|DAA47240.1| TPA: hypothetical protein ZEAMMB73_011944 [Zea mays]
          Length = 544

 Score =  121 bits (303), Expect = 7e-26
 Identities = 66/113 (58%), Positives = 76/113 (67%), Gaps = 17/113 (15%)
 Frame = -1

Query: 290 AVQESDTLLPGRSIG-DDNSSREKTFEAGEKIAIPVSD----EDPDGD------------ 162
           AV+E+  LLP  +   DD    E+ +EA EK+ + +S     ED DGD            
Sbjct: 20  AVEEARALLPAPAPDYDDEDLEERAYEAAEKVIVSISGGPDPEDVDGDGDGAELCSSSGS 79

Query: 161 SVPSFSWRKLWLFMGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLLWATA 3
           S P FSWRKLWLF GPGFLMSIAFLDPGNLEGDLQAGAVAG +LLWLL+WATA
Sbjct: 80  SPPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGDTLLWLLMWATA 132


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