BLASTX nr result

ID: Dioscorea21_contig00034878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034878
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515001.1| pentatricopeptide repeat-containing protein,...    83   3e-14
ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containi...    82   4e-14
ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-14
ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13

>ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546052|gb|EEF47555.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 466

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 36/64 (56%), Positives = 51/64 (79%)
 Frame = +1

Query: 1   STYSLLIHGLCKAGKFEWACNLFEEMIGLDISPRFETCRLLLDEAGQRGLYDIAERIKSL 180
           S Y+LL+HGLC+A K EWA  LFEEMIG D++P+++TCRLLLDE   + +YD A++I+ +
Sbjct: 403 SAYTLLVHGLCRANKCEWAYCLFEEMIGKDMTPKYQTCRLLLDEVKLKHMYDAAQKIEIV 462

Query: 181 LTKI 192
           + KI
Sbjct: 463 MQKI 466


>ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Glycine max]
          Length = 490

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 37/64 (57%), Positives = 48/64 (75%)
 Frame = +1

Query: 1   STYSLLIHGLCKAGKFEWACNLFEEMIGLDISPRFETCRLLLDEAGQRGLYDIAERIKSL 180
           STY+LLIHGLC+  +  WA +LFEEMI  DI PR+ TCRLLLDE  Q+ +Y  AE+I+ L
Sbjct: 427 STYTLLIHGLCREDRCNWAFSLFEEMIDQDIIPRYRTCRLLLDEVKQKNMYQAAEKIEDL 486

Query: 181 LTKI 192
           + K+
Sbjct: 487 MKKL 490


>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial [Vitis vinifera]
          Length = 496

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 36/65 (55%), Positives = 50/65 (76%)
 Frame = +1

Query: 1   STYSLLIHGLCKAGKFEWACNLFEEMIGLDISPRFETCRLLLDEAGQRGLYDIAERIKSL 180
           S Y+LLIHGLC+A K EW  NLFEEM+G  I+PR++TC LLLDE  Q+ ++D AERI+  
Sbjct: 429 SAYTLLIHGLCRANKCEWGYNLFEEMVGKAITPRYKTCALLLDEIKQKNMHDAAERIEVF 488

Query: 181 LTKIE 195
           + +++
Sbjct: 489 MKQMK 493


>ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 488

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/64 (56%), Positives = 49/64 (76%)
 Frame = +1

Query: 1   STYSLLIHGLCKAGKFEWACNLFEEMIGLDISPRFETCRLLLDEAGQRGLYDIAERIKSL 180
           STYSLLIHGLC+A K +WA  LFE+MI  DI PR+ TC+LLLDE  Q+ +  +A+RI+ +
Sbjct: 425 STYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNMDGVADRIEGI 484

Query: 181 LTKI 192
           + K+
Sbjct: 485 MKKL 488


>ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/64 (56%), Positives = 49/64 (76%)
 Frame = +1

Query: 1   STYSLLIHGLCKAGKFEWACNLFEEMIGLDISPRFETCRLLLDEAGQRGLYDIAERIKSL 180
           STYSLLIHGLC+A K +WA  LFE+MI  DI PR+ TC+LLLDE  Q+ +  +A+RI+ +
Sbjct: 456 STYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNMDGVADRIEGI 515

Query: 181 LTKI 192
           + K+
Sbjct: 516 MKKL 519


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