BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034868
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29241.3| unnamed protein product [Vitis vinifera]              174   2e-41
ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi...   174   2e-41
ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat...   172   6e-41
ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|2...   169   4e-40
ref|XP_003604365.1| Pentatricopeptide repeat-containing protein ...   168   7e-40

>emb|CBI29241.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  174 bits (440), Expect = 2e-41
 Identities = 80/150 (53%), Positives = 107/150 (71%)
 Frame = -2

Query: 636 PKIQHYGCMVDLLGRSGHLEEAFSLVRNMPMKANDVVWRALLGAAKNHGNIEIAECAARH 457
           P+I+HYGCMVDLLGR+G LEE+  L+ NMP+K +DV+W+ALLGA K HGN+E+ +  A H
Sbjct: 277 PRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEH 336

Query: 456 LIELAPQDSSSYVLLSNIYGCIGQCESARDMWKIMKERGIAKTPGCSFIELKGILHEFTA 277
           L+ELAP DS SYV LSNIY  +G  E    +  +MKE  + K PGCS+IEL G++HEF  
Sbjct: 337 LMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLV 396

Query: 276 GDTSHPAAMDIYLLLSNLTHGLMLAGYVPD 187
            D SHP +  I+ +L  ++  L+L GY P+
Sbjct: 397 EDDSHPKSKKIHSMLQEMSRNLILVGYRPN 426


>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  174 bits (440), Expect = 2e-41
 Identities = 80/150 (53%), Positives = 107/150 (71%)
 Frame = -2

Query: 636 PKIQHYGCMVDLLGRSGHLEEAFSLVRNMPMKANDVVWRALLGAAKNHGNIEIAECAARH 457
           P+I+HYGCMVDLLGR+G LEE+  L+ NMP+K +DV+W+ALLGA K HGN+E+ +  A H
Sbjct: 394 PRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEH 453

Query: 456 LIELAPQDSSSYVLLSNIYGCIGQCESARDMWKIMKERGIAKTPGCSFIELKGILHEFTA 277
           L+ELAP DS SYV LSNIY  +G  E    +  +MKE  + K PGCS+IEL G++HEF  
Sbjct: 454 LMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLV 513

Query: 276 GDTSHPAAMDIYLLLSNLTHGLMLAGYVPD 187
            D SHP +  I+ +L  ++  L+L GY P+
Sbjct: 514 EDDSHPKSKKIHSMLQEMSRNLILVGYRPN 543


>ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  172 bits (435), Expect = 6e-41
 Identities = 79/150 (52%), Positives = 107/150 (71%)
 Frame = -2

Query: 636 PKIQHYGCMVDLLGRSGHLEEAFSLVRNMPMKANDVVWRALLGAAKNHGNIEIAECAARH 457
           P + HYGCMVDLLGR+G LEEA  ++ NMP+K N +VW +LLGA + H N+++AE AA+ 
Sbjct: 475 PNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQ 534

Query: 456 LIELAPQDSSSYVLLSNIYGCIGQCESARDMWKIMKERGIAKTPGCSFIELKGILHEFTA 277
           ++EL P++ + YVLL NIY    + E+ R + K+M ERGI KTPGCS +EL G ++EF A
Sbjct: 535 ILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVA 594

Query: 276 GDTSHPAAMDIYLLLSNLTHGLMLAGYVPD 187
           GD SHP + +IY  L N+   L+ AGY PD
Sbjct: 595 GDQSHPQSKEIYAKLENMMQDLIKAGYSPD 624


>ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|222836077|gb|EEE74498.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  169 bits (428), Expect = 4e-40
 Identities = 77/150 (51%), Positives = 105/150 (70%)
 Frame = -2

Query: 636 PKIQHYGCMVDLLGRSGHLEEAFSLVRNMPMKANDVVWRALLGAAKNHGNIEIAECAARH 457
           P I HYGCMVDLLG++GHL+EA  +++NMPMK N +VW ALLGA + H + E+AE A   
Sbjct: 398 PNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQ 457

Query: 456 LIELAPQDSSSYVLLSNIYGCIGQCESARDMWKIMKERGIAKTPGCSFIELKGILHEFTA 277
           ++EL P + + YVL  NIY    + +  R++ ++M +RGI KTPGCS IE+ GI+HEF A
Sbjct: 458 ILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVA 517

Query: 276 GDTSHPAAMDIYLLLSNLTHGLMLAGYVPD 187
           GD SHP   +IY  L+ +T  L +AGY P+
Sbjct: 518 GDQSHPQTKEIYGKLNKMTSDLKIAGYSPN 547


>ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355505420|gb|AES86562.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  168 bits (426), Expect = 7e-40
 Identities = 76/150 (50%), Positives = 106/150 (70%)
 Frame = -2

Query: 636 PKIQHYGCMVDLLGRSGHLEEAFSLVRNMPMKANDVVWRALLGAAKNHGNIEIAECAARH 457
           P + HYGCMVDLLGR+GHL+EA  ++ NMP+K N +VW +LLGA + H N+++AE AA  
Sbjct: 507 PNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANE 566

Query: 456 LIELAPQDSSSYVLLSNIYGCIGQCESARDMWKIMKERGIAKTPGCSFIELKGILHEFTA 277
           ++EL P++ + YVLL NIY    + ++  ++ K+M ERGI K PGCS +E+ GI++EF A
Sbjct: 567 ILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVA 626

Query: 276 GDTSHPAAMDIYLLLSNLTHGLMLAGYVPD 187
           GD SHP + +IY  L N+   L  AGY PD
Sbjct: 627 GDKSHPQSKEIYAKLENMKQDLSNAGYSPD 656