BLASTX nr result

ID: Dioscorea21_contig00034851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034851
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV41041.1| putative pentatricopeptide [Oryza minuta]              144   1e-32
emb|CAH67767.1| H0322F07.4 [Oryza sativa Indica Group] gi|125550...   140   1e-31
ref|NP_001054227.1| Os04g0672700 [Oryza sativa Japonica Group] g...   140   1e-31
gb|AEV41088.1| putative pentatricopeptide [Oryza minuta]              138   4e-31
ref|XP_002448752.1| hypothetical protein SORBIDRAFT_06g032560 [S...   133   1e-29

>gb|AEV41041.1| putative pentatricopeptide [Oryza minuta]
          Length = 724

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/91 (73%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
 Frame = -1

Query: 272 LQPDHVTYVSLLSACGHCGFVERGRFYWFCMTCDGIMPGIKHYTCMVSMLSRAGLLLETE 93
           LQPDHVTY+SLLSAC HCG VE+G+FYWFCM  DGIMPG KHYT MVS+LSRAGLL E  
Sbjct: 531 LQPDHVTYISLLSACSHCGLVEKGKFYWFCMMTDGIMPGFKHYTSMVSLLSRAGLLDEAV 590

Query: 92  ELIMKSQF-ERSPELWRILLSSCATLRNLDM 3
           +L+MKS F ++ PELWRILLSSC T RNL +
Sbjct: 591 DLMMKSPFTKKCPELWRILLSSCITFRNLSI 621


>emb|CAH67767.1| H0322F07.4 [Oryza sativa Indica Group] gi|125550186|gb|EAY96008.1|
           hypothetical protein OsI_17879 [Oryza sativa Indica
           Group]
          Length = 719

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/91 (70%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
 Frame = -1

Query: 272 LQPDHVTYVSLLSACGHCGFVERGRFYWFCMTCDGIMPGIKHYTCMVSMLSRAGLLLETE 93
           LQPDHVTY+S+LSAC HCG VE+G+FYWFCM  DGI+PG KHYT MVS+L RAGLL E  
Sbjct: 526 LQPDHVTYISILSACSHCGLVEKGKFYWFCMMTDGIVPGFKHYTSMVSLLGRAGLLDEAV 585

Query: 92  ELIMKSQF-ERSPELWRILLSSCATLRNLDM 3
           +L+MKS F ++ PELWRILLSSC T RNL +
Sbjct: 586 DLMMKSPFAKKCPELWRILLSSCITFRNLSI 616


>ref|NP_001054227.1| Os04g0672700 [Oryza sativa Japonica Group]
           gi|70663948|emb|CAE54552.2| OSJNBb0004A17.12 [Oryza
           sativa Japonica Group] gi|113565798|dbj|BAF16141.1|
           Os04g0672700 [Oryza sativa Japonica Group]
           gi|125592028|gb|EAZ32378.1| hypothetical protein
           OsJ_16588 [Oryza sativa Japonica Group]
          Length = 719

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/91 (70%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
 Frame = -1

Query: 272 LQPDHVTYVSLLSACGHCGFVERGRFYWFCMTCDGIMPGIKHYTCMVSMLSRAGLLLETE 93
           LQPDHVTY+S+LSAC HCG VE+G+FYWFCM  DGI+PG KHYT MVS+L RAGLL E  
Sbjct: 526 LQPDHVTYISILSACSHCGLVEKGKFYWFCMMTDGIVPGFKHYTSMVSLLGRAGLLDEAV 585

Query: 92  ELIMKSQF-ERSPELWRILLSSCATLRNLDM 3
           +L+MKS F ++ PELWRILLSSC T RNL +
Sbjct: 586 DLMMKSPFAKKCPELWRILLSSCITFRNLSI 616


>gb|AEV41088.1| putative pentatricopeptide [Oryza minuta]
          Length = 760

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/91 (70%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
 Frame = -1

Query: 272 LQPDHVTYVSLLSACGHCGFVERGRFYWFCMTCDGIMPGIKHYTCMVSMLSRAGLLLETE 93
           LQPDHVTY+SLLSAC HCG VE+G+FYWFCM  DGI+PG KHYT MVS+LSRAGLL E  
Sbjct: 567 LQPDHVTYISLLSACSHCGLVEKGKFYWFCMMTDGIVPGFKHYTSMVSLLSRAGLLEEAV 626

Query: 92  ELIMKSQF-ERSPELWRILLSSCATLRNLDM 3
           +L+MK  F ++ PELWRILLSSC   RNL +
Sbjct: 627 DLMMKCPFTKKCPELWRILLSSCIPFRNLSI 657


>ref|XP_002448752.1| hypothetical protein SORBIDRAFT_06g032560 [Sorghum bicolor]
           gi|241939935|gb|EES13080.1| hypothetical protein
           SORBIDRAFT_06g032560 [Sorghum bicolor]
          Length = 686

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/91 (69%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
 Frame = -1

Query: 272 LQPDHVTYVSLLSACGHCGFVERGRFYWFCMTCDGIMPGIKHYTCMVSMLSRAGLLLETE 93
           LQPDHVTY+SLLSAC HCG VE+G+ YWFCM  DGI+PG KHYT MVS+LSRAGLL E  
Sbjct: 493 LQPDHVTYISLLSACSHCGLVEKGKLYWFCMINDGIVPGFKHYTSMVSLLSRAGLLEEAV 552

Query: 92  ELIMKS-QFERSPELWRILLSSCATLRNLDM 3
           +LI KS   +R PELWRILLSSC T ++L +
Sbjct: 553 DLINKSPSAKRYPELWRILLSSCVTFKDLSI 583


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