BLASTX nr result
ID: Dioscorea21_contig00034824
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00034824
(613 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN75226.1| hypothetical protein VITISV_035857 [Vitis vinifera] 151 2e-44
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera] 150 2e-44
gb|AAO23078.1| polyprotein [Glycine max] 149 3e-44
ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782... 149 5e-42
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 137 6e-42
>emb|CAN75226.1| hypothetical protein VITISV_035857 [Vitis vinifera]
Length = 422
Score = 151 bits (381), Expect(2) = 2e-44
Identities = 70/158 (44%), Positives = 102/158 (64%)
Frame = -2
Query: 612 RV*VPNNSALRQLLIPEYHTTPVGGHAGIQRMLHRFTSTFTWPELKKNTRDFINNCHIYQ 433
RV +P NS + + L+ E+H +P+GGH+G+ R R F WP + + +D++++C + Q
Sbjct: 28 RVVIPLNSPIIKQLLREFHDSPIGGHSGVLRTYKRLAQQFYWPSMFQIVQDYVSSCDVCQ 87
Query: 432 TVKPFNHGPKGLL*PLQIPGQIWESVMMDLITHLPLSSGKTVVLIIVDRLSKQAHFLVLP 253
VK P GLL PL IP +W+ + MD I LP S+GK +L++VDRLSK AHFL L
Sbjct: 88 RVKSETLAPAGLLQPLPIPCLVWDDITMDFIEGLPTSNGKNTILVVVDRLSKSAHFLALA 147
Query: 252 TQFISPQVVEIFTIDIIHLHGVPTSLVSDRDPLFISQF 139
FI+ V E F ++ LHG+P S++SDRD +F+SQF
Sbjct: 148 HPFIAKMVAEKFVEGVVKLHGMPKSIISDRDLVFMSQF 185
Score = 53.9 bits (128), Expect(2) = 2e-44
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = -1
Query: 136 RELF*LQCTQLSMSSSYHPQTNG*TEIINCYLEDYLRCFVGDHP 5
+E F L QL MSSSYHPQT+G +E++N +E YLRC+ HP
Sbjct: 187 QEFFKLSGIQLKMSSSYHPQTDGQSEVVNRCVEQYLRCYAHHHP 230
>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
Length = 647
Score = 150 bits (379), Expect(2) = 2e-44
Identities = 70/158 (44%), Positives = 98/158 (62%)
Frame = -2
Query: 612 RV*VPNNSALRQLLIPEYHTTPVGGHAGIQRMLHRFTSTFTWPELKKNTRDFINNCHIYQ 433
RV VP S + L+ E+H +P+GGH+G+ R R F WP + + +++++C + Q
Sbjct: 188 RVVVPPQSHIPNQLLREFHDSPLGGHSGVLRTYKRIAQQFYWPSMYRMVNEYVSSCDVCQ 247
Query: 432 TVKPFNHGPKGLL*PLQIPGQIWESVMMDLITHLPLSSGKTVVLIIVDRLSKQAHFLVLP 253
K P GLL PL IP Q+W+ + MD I LP S GK +L++VDRLSK AHFL L
Sbjct: 248 RAKASTLSPAGLLQPLPIPCQVWDDITMDFIEGLPPSQGKNTILVVVDRLSKSAHFLALT 307
Query: 252 TQFISPQVVEIFTIDIIHLHGVPTSLVSDRDPLFISQF 139
F + V E F +I LHG+P+S++SDRDP+FIS F
Sbjct: 308 HPFSAKMVAEKFVDGVIKLHGMPSSIISDRDPIFISNF 345
Score = 54.3 bits (129), Expect(2) = 2e-44
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -1
Query: 133 ELF*LQCTQLSMSSSYHPQTNG*TEIINCYLEDYLRCFVGDHP 5
E F L TQL MSS+YHPQT+G TE+IN +E YLRC V P
Sbjct: 348 EFFKLSGTQLKMSSAYHPQTDGQTEVINRCVEQYLRCLVHQQP 390
>gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 149 bits (377), Expect(2) = 3e-44
Identities = 72/158 (45%), Positives = 101/158 (63%)
Frame = -2
Query: 612 RV*VPNNSALRQLLIPEYHTTPVGGHAGIQRMLHRFTSTFTWPELKKNTRDFINNCHIYQ 433
RV +P + ++ EYH++P+GGHAGI R L R + F WP+++++ + +I C I Q
Sbjct: 1061 RVVIPAEEEIVNKILQEYHSSPIGGHAGITRTLARLKAQFYWPKMQEDVKAYIQKCLICQ 1120
Query: 432 TVKPFNHGPKGLL*PLQIPGQIWESVMMDLITHLPLSSGKTVVLIIVDRLSKQAHFLVLP 253
K N P GLL PL IP Q+WE V MD IT LP S G +V+++++DRL+K AHF+ L
Sbjct: 1121 QAKSNNTLPAGLLQPLPIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLK 1180
Query: 252 TQFISPQVVEIFTIDIIHLHGVPTSLVSDRDPLFISQF 139
+ S V E F I+ LHG+P S+VSDRD +F S F
Sbjct: 1181 ADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRVFTSTF 1218
Score = 54.7 bits (130), Expect(2) = 3e-44
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -1
Query: 136 RELF*LQCTQLSMSSSYHPQTNG*TEIINCYLEDYLRCFVGDHP 5
+ LF LQ T L+MSS+YHPQ++G +E++N LE YLRCF +HP
Sbjct: 1220 QHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRCFTYEHP 1263
>ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
Length = 1863
Score = 149 bits (377), Expect(2) = 5e-42
Identities = 69/145 (47%), Positives = 91/145 (62%)
Frame = -2
Query: 573 LIPEYHTTPVGGHAGIQRMLHRFTSTFTWPELKKNTRDFINNCHIYQTVKPFNHGPKGLL 394
L+ EYH TP+GGH G+++ LHR S F W + + + FI C I Q VK P GLL
Sbjct: 994 LLHEYHATPIGGHFGVKKTLHRLRSNFHWSSMSNDVKAFIRKCSICQQVKHLTRKPAGLL 1053
Query: 393 *PLQIPGQIWESVMMDLITHLPLSSGKTVVLIIVDRLSKQAHFLVLPTQFISPQVVEIFT 214
P+ I IWE + +D ITHLP S G TV+L++VDR SK H LPTQF + +V +F
Sbjct: 1054 QPIPILSNIWEDLSIDFITHLPSSHGFTVILVVVDRFSKGVHLGALPTQFSAFKVATLFV 1113
Query: 213 IDIIHLHGVPTSLVSDRDPLFISQF 139
+ LHG P S++SDRDP+F+S F
Sbjct: 1114 DTVCKLHGFPRSIISDRDPIFLSSF 1138
Score = 47.4 bits (111), Expect(2) = 5e-42
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = -1
Query: 160 PLIHQPI*RELF*LQCTQLSMSSSYHPQTNG*TEIINCYLEDYLRCFVGDHP 5
P+ RELF L T L M+++YHPQ++G TE +N +E YLR FV P
Sbjct: 1132 PIFLSSFWRELFRLSGTTLRMTTAYHPQSDGQTEAMNRTIEKYLRSFVRQQP 1183
>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 137 bits (345), Expect(2) = 6e-42
Identities = 62/158 (39%), Positives = 96/158 (60%)
Frame = -2
Query: 612 RV*VPNNSALRQLLIPEYHTTPVGGHAGIQRMLHRFTSTFTWPELKKNTRDFINNCHIYQ 433
R+ V + S + L+ E+H+TP GGH+G R R + W +K ++++ +C Q
Sbjct: 852 RLVVSSKSVMIPTLLAEFHSTPQGGHSGFYRTYRRLAANVYWVGMKNTVQEYVRSCDTCQ 911
Query: 432 TVKPFNHGPKGLL*PLQIPGQIWESVMMDLITHLPLSSGKTVVLIIVDRLSKQAHFLVLP 253
K P GLL PL +P +IWE + MD I LP S G VL++VDRLSK +HF++L
Sbjct: 912 RQKYLASSPGGLLQPLPVPDRIWEDLSMDFIMGLPKSKGYEAVLVVVDRLSKYSHFILLK 971
Query: 252 TQFISPQVVEIFTIDIIHLHGVPTSLVSDRDPLFISQF 139
+ + + ++F +++ LHG+P S+VSDRDP+F+S F
Sbjct: 972 HPYTAKVIADVFIREVVRLHGIPLSIVSDRDPIFMSNF 1009
Score = 59.3 bits (142), Expect(2) = 6e-42
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = -1
Query: 160 PLIHQPI*RELF*LQCTQLSMSSSYHPQTNG*TEIINCYLEDYLRCFVGDHP 5
P+ +ELF LQ T+L MS +YHP+T+G TE++N LE YLRCF+ D P
Sbjct: 1003 PIFMSNFWKELFKLQGTKLKMSIAYHPETDGQTEVVNRCLETYLRCFIADQP 1054