BLASTX nr result

ID: Dioscorea21_contig00034806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034806
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001065926.1| Os12g0104400 [Oryza sativa Japonica Group] g...   197   1e-48
tpg|DAA59143.1| TPA: omega-3 fatty acid desaturase [Zea mays]         193   1e-47
ref|NP_001149938.1| omega-3 fatty acid desaturase [Zea mays] gi|...   193   1e-47
ref|XP_002442647.1| hypothetical protein SORBIDRAFT_08g000460 [S...   193   1e-47
ref|XP_002312163.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47

>ref|NP_001065926.1| Os12g0104400 [Oryza sativa Japonica Group]
           gi|77552800|gb|ABA95596.1| Omega-3 fatty acid
           desaturase, chloroplast precursor, putative, expressed
           [Oryza sativa Japonica Group]
           gi|113648433|dbj|BAF28945.1| Os12g0104400 [Oryza sativa
           Japonica Group] gi|215700937|dbj|BAG92361.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218186255|gb|EEC68682.1| hypothetical protein
           OsI_37136 [Oryza sativa Indica Group]
           gi|222616464|gb|EEE52596.1| hypothetical protein
           OsJ_34906 [Oryza sativa Japonica Group]
          Length = 385

 Score =  197 bits (500), Expect = 1e-48
 Identities = 84/105 (80%), Positives = 94/105 (89%)
 Frame = +3

Query: 6   YWLAQGTMFWALFVLGHDCGHGSFSESVKMNNLVGHFLHSFILVPYHGWRISHKTHHQNH 185
           YW AQGTMFWALFVLGHDCGHGSFS+S  +NN+VGH LHSFILVPYHGWRISH+THHQNH
Sbjct: 84  YWAAQGTMFWALFVLGHDCGHGSFSDSAMLNNVVGHLLHSFILVPYHGWRISHRTHHQNH 143

Query: 186 GHVEKDESWHPLTETLYRRLNFVTLKLRFTIPFPMLAYPVYLLRR 320
           GH+EKDESWHP+TE LYR+L   T KLRFT+PFP+LA+PVYL  R
Sbjct: 144 GHIEKDESWHPITEKLYRKLETRTKKLRFTLPFPLLAFPVYLWYR 188


>tpg|DAA59143.1| TPA: omega-3 fatty acid desaturase [Zea mays]
          Length = 402

 Score =  193 bits (491), Expect = 1e-47
 Identities = 82/105 (78%), Positives = 94/105 (89%)
 Frame = +3

Query: 6   YWLAQGTMFWALFVLGHDCGHGSFSESVKMNNLVGHFLHSFILVPYHGWRISHKTHHQNH 185
           YW AQGTMFWALFVLGHDCGHGSFS+S  +N++VGH LHSFILVPYHGWRISH+THHQNH
Sbjct: 94  YWAAQGTMFWALFVLGHDCGHGSFSDSATLNSVVGHLLHSFILVPYHGWRISHRTHHQNH 153

Query: 186 GHVEKDESWHPLTETLYRRLNFVTLKLRFTIPFPMLAYPVYLLRR 320
           GH+ +DESWHP+TE LYR+L   T KLRFT+PFP+LA+PVYLL R
Sbjct: 154 GHIHRDESWHPITEKLYRQLEPRTKKLRFTVPFPLLAFPVYLLYR 198


>ref|NP_001149938.1| omega-3 fatty acid desaturase [Zea mays]
           gi|195635609|gb|ACG37273.1| omega-3 fatty acid
           desaturase [Zea mays]
          Length = 384

 Score =  193 bits (491), Expect = 1e-47
 Identities = 82/105 (78%), Positives = 94/105 (89%)
 Frame = +3

Query: 6   YWLAQGTMFWALFVLGHDCGHGSFSESVKMNNLVGHFLHSFILVPYHGWRISHKTHHQNH 185
           YW AQGTMFWALFVLGHDCGHGSFS+S  +N++VGH LHSFILVPYHGWRISH+THHQNH
Sbjct: 76  YWAAQGTMFWALFVLGHDCGHGSFSDSATLNSVVGHLLHSFILVPYHGWRISHRTHHQNH 135

Query: 186 GHVEKDESWHPLTETLYRRLNFVTLKLRFTIPFPMLAYPVYLLRR 320
           GH+ +DESWHP+TE LYR+L   T KLRFT+PFP+LA+PVYLL R
Sbjct: 136 GHIHRDESWHPITEKLYRQLEPRTKKLRFTVPFPLLAFPVYLLYR 180


>ref|XP_002442647.1| hypothetical protein SORBIDRAFT_08g000460 [Sorghum bicolor]
           gi|241943340|gb|EES16485.1| hypothetical protein
           SORBIDRAFT_08g000460 [Sorghum bicolor]
          Length = 429

 Score =  193 bits (490), Expect = 1e-47
 Identities = 82/105 (78%), Positives = 94/105 (89%)
 Frame = +3

Query: 6   YWLAQGTMFWALFVLGHDCGHGSFSESVKMNNLVGHFLHSFILVPYHGWRISHKTHHQNH 185
           YW AQGTMFWALFVLGHDCGHGSFS+S  +N++VGH LHSFILVPYHGWRISH+THHQNH
Sbjct: 123 YWAAQGTMFWALFVLGHDCGHGSFSDSPTLNSVVGHLLHSFILVPYHGWRISHRTHHQNH 182

Query: 186 GHVEKDESWHPLTETLYRRLNFVTLKLRFTIPFPMLAYPVYLLRR 320
           GH+ +DESWHP+TE LYR+L   T KLRFT+PFP+LA+PVYLL R
Sbjct: 183 GHIHRDESWHPITEGLYRQLETRTKKLRFTVPFPLLAFPVYLLYR 227


>ref|XP_002312163.1| predicted protein [Populus trichocarpa] gi|222851983|gb|EEE89530.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  193 bits (490), Expect = 1e-47
 Identities = 84/105 (80%), Positives = 92/105 (87%)
 Frame = +3

Query: 6   YWLAQGTMFWALFVLGHDCGHGSFSESVKMNNLVGHFLHSFILVPYHGWRISHKTHHQNH 185
           YW AQGTMFWALFVLGHDCGHGSFS + K+N++VGH LHS ILVPYHGWRISH+THHQNH
Sbjct: 154 YWFAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNH 213

Query: 186 GHVEKDESWHPLTETLYRRLNFVTLKLRFTIPFPMLAYPVYLLRR 320
           GHVE DESWHPL E +YR L+ VT KLRFT+PFPMLAYPVYL  R
Sbjct: 214 GHVENDESWHPLPEKIYRSLDNVTRKLRFTLPFPMLAYPVYLWNR 258


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