BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034800
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB73912.1| polyprotein [Citrus sinensis]                          114   8e-24
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             111   5e-23
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              111   5e-23
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              111   5e-23
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              111   5e-23

>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/103 (55%), Positives = 70/103 (67%), Gaps = 9/103 (8%)
 Frame = +2

Query: 2   VTRGRPIERGSSGSYNHGRSKSRSKKTFKCYHCGKKGHLKKDCWSLNKK-------DSNP 160
           VTRGR  ERG SGS NHGRSKSRSKK  KCY+CGKKGH+KK+CWS  K+        SN 
Sbjct: 201 VTRGRSTERGPSGSQNHGRSKSRSKKNVKCYNCGKKGHVKKECWSNQKRREGKEPESSNA 260

Query: 161 QGNVANALEDGNAMVCE--VATNTGRRFADVWLLDSAATFRMT 283
           QG VA+  +DG  +  E  + +   +R +DVWL+DS AT+ MT
Sbjct: 261 QGCVASTSDDGEILYSEATIVSEGRKRLSDVWLIDSGATWHMT 303


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
 Frame = +2

Query: 2   VTRGRPIERGSSGSYNHGRSKSRSKKTFKCYHCGKKGHLKKDCWSLNKKDSNPQGNVANA 181
           V RGR  ERG S     GRSKS SKK   CY+CGKKGHLKKDCW+L  ++SNPQGNVA+ 
Sbjct: 202 VMRGRSTERGQSSG--RGRSKS-SKKNLTCYNCGKKGHLKKDCWNL-AQNSNPQGNVAST 257

Query: 182 LEDGNAMVCE--VATNTGRRFADVWLLDSAATFRMT 283
            +DG+A+ CE  +A    +RFAD+WL+DS AT+ MT
Sbjct: 258 SDDGSALCCEASIAREGRKRFADIWLIDSGATYHMT 293


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/103 (53%), Positives = 69/103 (66%), Gaps = 8/103 (7%)
 Frame = +2

Query: 2   VTRGRPIERGSSGSYNHGRSKSRSKKTFKCYHCGKKGHLKKDCWSL------NKKDSNPQ 163
           +TRGR  ERG SGS NHGRSKSR KK  KCY CG KGH+KK+CW++      N + S  Q
Sbjct: 201 MTRGRSTERGPSGSQNHGRSKSRRKKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQ 260

Query: 164 GNVANALEDGNAMVCEVATNT--GRRFADVWLLDSAATFRMTP 286
           G VA+  +DG  +  E AT++   RR  DVW++DS AT+ MTP
Sbjct: 261 GCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWHMTP 303


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/103 (53%), Positives = 69/103 (66%), Gaps = 8/103 (7%)
 Frame = +2

Query: 2   VTRGRPIERGSSGSYNHGRSKSRSKKTFKCYHCGKKGHLKKDCWSL------NKKDSNPQ 163
           +TRGR  ERG SGS NHGRSKSR KK  KCY CG KGH+KK+CW++      N + S  Q
Sbjct: 201 MTRGRSTERGPSGSQNHGRSKSRRKKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQ 260

Query: 164 GNVANALEDGNAMVCEVATNT--GRRFADVWLLDSAATFRMTP 286
           G VA+  +DG  +  E AT++   RR  DVW++DS AT+ MTP
Sbjct: 261 GCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWHMTP 303


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/103 (53%), Positives = 69/103 (66%), Gaps = 8/103 (7%)
 Frame = +2

Query: 2   VTRGRPIERGSSGSYNHGRSKSRSKKTFKCYHCGKKGHLKKDCWSL------NKKDSNPQ 163
           +TRGR  ERG SGS NHGRSKSR KK  KCY CG KGH+KK+CW++      N + S  Q
Sbjct: 201 MTRGRSTERGPSGSQNHGRSKSRRKKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQ 260

Query: 164 GNVANALEDGNAMVCEVATNT--GRRFADVWLLDSAATFRMTP 286
           G VA+  +DG  +  E AT++   RR  DVW++DS AT+ MTP
Sbjct: 261 GCVASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWHMTP 303