BLASTX nr result

ID: Dioscorea21_contig00034799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034799
         (181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066909.1| Os12g0527800 [Oryza sativa Japonica Group] g...    61   8e-08
gb|EEE53323.1| hypothetical protein OsJ_36320 [Oryza sativa Japo...    61   8e-08
ref|XP_003575905.1| PREDICTED: uncharacterized protein LOC100821...    57   2e-06
gb|AFW56576.1| RING/FYVE/PHD-type zinc finger family protein [Ze...    55   4e-06
ref|XP_002443271.1| hypothetical protein SORBIDRAFT_08g016700 [S...    55   6e-06

>ref|NP_001066909.1| Os12g0527800 [Oryza sativa Japonica Group]
           gi|77556508|gb|ABA99304.1| PHD-finger family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113649416|dbj|BAF29928.1| Os12g0527800 [Oryza sativa
           Japonica Group] gi|215717023|dbj|BAG95386.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 688

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = +3

Query: 6   DKVPKVHIKGSKSQILHMKESIGKNATKSEPVKGTKLVIHLGGKHRNTTCSPVSENVN 179
           D +PKV IKG+K   LH K+   +NA KS+  KGTKLVIH+G +H++ + SP SE  N
Sbjct: 372 DMIPKVKIKGTKVPSLHFKDVGEENAAKSDTGKGTKLVIHIGSRHKSRSGSPKSEMSN 429


>gb|EEE53323.1| hypothetical protein OsJ_36320 [Oryza sativa Japonica Group]
          Length = 756

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = +3

Query: 6   DKVPKVHIKGSKSQILHMKESIGKNATKSEPVKGTKLVIHLGGKHRNTTCSPVSENVN 179
           D +PKV IKG+K   LH K+   +NA KS+  KGTKLVIH+G +H++ + SP SE  N
Sbjct: 372 DMIPKVKIKGTKVPSLHFKDVGEENAAKSDTGKGTKLVIHIGSRHKSRSGSPKSEMSN 429


>ref|XP_003575905.1| PREDICTED: uncharacterized protein LOC100821635 [Brachypodium
           distachyon]
          Length = 809

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = +3

Query: 6   DKVPKVHIKGSKSQILHMKESIGKNATKSEPVKGTKLVIHLGGKHRNTTCSPVSENVN 179
           D +PKV I+GSK+  LH K+    N  KS+  KGTKLV H G +H++ + SP SE  N
Sbjct: 492 DMIPKVKIRGSKAPSLHFKDVGEVNTAKSDAGKGTKLVFHFGTRHKSGSGSPKSEMTN 549


>gb|AFW56576.1| RING/FYVE/PHD-type zinc finger family protein [Zea mays]
          Length = 819

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = +3

Query: 6   DKVPKVHIKGSKSQILHMKESIGKNATKSEPVKGTKLVIHLGGKHRNTTCSPVSENVN 179
           D +PKV IKGSK   LH K+   +N +K++  K TKLVIHLG +H+  + SP SE  N
Sbjct: 507 DMIPKVKIKGSKVSSLHYKDG-EENTSKADTGKATKLVIHLGSRHKTRSGSPKSELSN 563


>ref|XP_002443271.1| hypothetical protein SORBIDRAFT_08g016700 [Sorghum bicolor]
           gi|241943964|gb|EES17109.1| hypothetical protein
           SORBIDRAFT_08g016700 [Sorghum bicolor]
          Length = 531

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/58 (50%), Positives = 37/58 (63%)
 Frame = +3

Query: 6   DKVPKVHIKGSKSQILHMKESIGKNATKSEPVKGTKLVIHLGGKHRNTTCSPVSENVN 179
           D +PKV IKGSK   LH K+   +N  K++  K TKLVIHLG +H+  + SP SE  N
Sbjct: 219 DMIPKVKIKGSKVSTLHYKDG-EENTPKNDTGKATKLVIHLGSRHKTRSGSPKSELSN 275


Top