BLASTX nr result
ID: Dioscorea21_contig00034742
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00034742
(291 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,... 133 1e-29
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi... 123 1e-26
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera] 123 1e-26
gb|ACN85255.1| EMB2261 putative [Oryza officinalis] 120 9e-26
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2... 120 9e-26
>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 483
Score = 133 bits (335), Expect = 1e-29
Identities = 62/96 (64%), Positives = 80/96 (83%)
Frame = +3
Query: 3 ALLGGYSQSGNFNAVISLFQEMNWEGDCYSFGTLLRACAGLAAVRKGKEVHCQYLRLGRH 182
ALLGG+ Q+G+F +VI +F+EM D YSFGT+LRACAGLAAVR+GKEVHCQY+R G
Sbjct: 326 ALLGGFCQNGDFESVIRIFREMGEADDLYSFGTVLRACAGLAAVRQGKEVHCQYVRRGGW 385
Query: 183 GDVVVESALVDFYAKCGLIDYARRVFSKISARSLIS 290
DV++ESALVD YAKCG ID+A R+F+K++ R+LI+
Sbjct: 386 RDVIIESALVDLYAKCGCIDFAHRIFTKMTVRNLIT 421
Score = 79.7 bits (195), Expect = 2e-13
Identities = 36/100 (36%), Positives = 66/100 (66%), Gaps = 4/100 (4%)
Frame = +3
Query: 3 ALLGGYSQSGNFNAVISLF----QEMNWEGDCYSFGTLLRACAGLAAVRKGKEVHCQYLR 170
+++ Y+++ ++ + F +++ D ++FGT+L AC L +++GKEVH + +
Sbjct: 224 SVISAYTRNDMYDKALGFFYLMQRKLGLAPDGFTFGTVLTACGNLRRLKQGKEVHAKLIT 283
Query: 171 LGRHGDVVVESALVDFYAKCGLIDYARRVFSKISARSLIS 290
G G+VVVES+LVD Y KCGL+D ++RVF ++S ++ +S
Sbjct: 284 SGFSGNVVVESSLVDMYGKCGLVDESQRVFDRMSVKNSVS 323
>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 123 bits (309), Expect = 1e-26
Identities = 59/96 (61%), Positives = 77/96 (80%)
Frame = +3
Query: 3 ALLGGYSQSGNFNAVISLFQEMNWEGDCYSFGTLLRACAGLAAVRKGKEVHCQYLRLGRH 182
ALLGGY Q+G+F +VI +F++M + D Y FGT+LR CAGLAAVR+GKEVHCQY+R G
Sbjct: 334 ALLGGYCQNGDFKSVIQIFRKME-KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGW 392
Query: 183 GDVVVESALVDFYAKCGLIDYARRVFSKISARSLIS 290
DV+VESALVD YAKCG I+YA+ +F ++ R+LI+
Sbjct: 393 RDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLIT 428
Score = 70.5 bits (171), Expect = 1e-10
Identities = 33/100 (33%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Frame = +3
Query: 3 ALLGGYSQSGNFNAVISLFQEMNWEG----DCYSFGTLLRACAGLAAVRKGKEVHCQYLR 170
+++ +++ F+ + F M + D ++FGT+L AC L +++GKEVH + +
Sbjct: 232 SIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVIT 291
Query: 171 LGRHGDVVVESALVDFYAKCGLIDYARRVFSKISARSLIS 290
G G+VVVES+LVD Y KCG + ++R+F ++ ++ +S
Sbjct: 292 TGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVS 331
>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 123 bits (309), Expect = 1e-26
Identities = 59/96 (61%), Positives = 77/96 (80%)
Frame = +3
Query: 3 ALLGGYSQSGNFNAVISLFQEMNWEGDCYSFGTLLRACAGLAAVRKGKEVHCQYLRLGRH 182
ALLGGY Q+G+F +VI +F++M + D Y FGT+LR CAGLAAVR+GKEVHCQY+R G
Sbjct: 393 ALLGGYCQNGDFKSVIQIFRKME-KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGW 451
Query: 183 GDVVVESALVDFYAKCGLIDYARRVFSKISARSLIS 290
DV+VESALVD YAKCG I+YA+ +F ++ R+LI+
Sbjct: 452 RDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLIT 487
Score = 70.5 bits (171), Expect = 1e-10
Identities = 33/100 (33%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Frame = +3
Query: 3 ALLGGYSQSGNFNAVISLFQEMNWEG----DCYSFGTLLRACAGLAAVRKGKEVHCQYLR 170
+++ +++ F+ + F M + D ++FGT+L AC L +++GKEVH + +
Sbjct: 291 SIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVIT 350
Query: 171 LGRHGDVVVESALVDFYAKCGLIDYARRVFSKISARSLIS 290
G G+VVVES+LVD Y KCG + ++R+F ++ ++ +S
Sbjct: 351 TGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVS 390
>gb|ACN85255.1| EMB2261 putative [Oryza officinalis]
Length = 622
Score = 120 bits (302), Expect = 9e-26
Identities = 59/97 (60%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +3
Query: 3 ALLGGYSQSGNFNAVISLFQEMNWE-GDCYSFGTLLRACAGLAAVRKGKEVHCQYLRLGR 179
ALLGGY Q+G + VI+LF+EM+ E GD YS GT+LRACAGL++V+ GKE+HC++LR+G
Sbjct: 312 ALLGGYCQNGEYEKVIALFREMDKEDGDWYSLGTVLRACAGLSSVKPGKEIHCRFLRMGG 371
Query: 180 HGDVVVESALVDFYAKCGLIDYARRVFSKISARSLIS 290
DVVVESALVD YAKCG +DYA VF + R+ I+
Sbjct: 372 WRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTIT 408
Score = 59.3 bits (142), Expect = 3e-07
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Frame = +3
Query: 3 ALLGGYSQSGNFNAVISLFQEM----NWEGDCYSFGTLLRACAGLAAVRKGKEVHCQYLR 170
+L+ + ++ F + F+ M D +FG+++ A L +G++ H Q +
Sbjct: 210 SLISAFVRNDWFEEAVRWFRSMLMMNGVRPDGCTFGSMMTALGNLKRGSQGRQAHAQVVT 269
Query: 171 LGRHGDVVVESALVDFYAKCGLIDYARRVFSKISARSLIS 290
G G+V+VES+ +D YAKCGL+ AR+VF ++ R+ +S
Sbjct: 270 RGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMQVRNEVS 309
>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
predicted protein [Populus trichocarpa]
Length = 606
Score = 120 bits (302), Expect = 9e-26
Identities = 61/96 (63%), Positives = 77/96 (80%)
Frame = +3
Query: 3 ALLGGYSQSGNFNAVISLFQEMNWEGDCYSFGTLLRACAGLAAVRKGKEVHCQYLRLGRH 182
ALLGGY Q+G+F +VI +F+E + D YSFGT+LRACAGLAAVR+GKEVHCQY++
Sbjct: 335 ALLGGYCQNGDFESVIRIFREGK-KVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCW 393
Query: 183 GDVVVESALVDFYAKCGLIDYARRVFSKISARSLIS 290
DVV ESALVD YAKCG ID+A R+F ++S R+LI+
Sbjct: 394 RDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLIT 429
Score = 72.0 bits (175), Expect = 5e-11
Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Frame = +3
Query: 3 ALLGGYSQSGNFNAVISLFQEM----NWEGDCYSFGTLLRACAGLAAVRKGKEVHCQYLR 170
+++ ++++ ++ + F M D ++FGT+L AC L +++GKEVH + +
Sbjct: 233 SIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVIT 292
Query: 171 LGRHGDVVVESALVDFYAKCGLIDYARRVFSKISARSLIS 290
G G+V VES+LVD Y KC L++ ++ VF ++S ++L+S
Sbjct: 293 SGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVS 332