BLASTX nr result

ID: Dioscorea21_contig00034718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034718
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26
ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26
emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]   121   7e-26
ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24

>ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  122 bits (306), Expect = 3e-26
 Identities = 55/68 (80%), Positives = 60/68 (88%)
 Frame = +2

Query: 2   SEKLALAFSLVNTAPGTPIRIVKNLRVCDDCHAATKLLSKIYDRVIIMRDRNRFHRFSKG 181
           SEKLA AF L++TAPGTPIRIVKNLR+CDDCHAATKLLSKIY R II+RDRNRFH FS+G
Sbjct: 678 SEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEG 737

Query: 182 VCSCQDYW 205
            CSC  YW
Sbjct: 738 YCSCMGYW 745


>ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/68 (80%), Positives = 61/68 (89%)
 Frame = +2

Query: 2   SEKLALAFSLVNTAPGTPIRIVKNLRVCDDCHAATKLLSKIYDRVIIMRDRNRFHRFSKG 181
           SEKLA+AF L++TAP TPIRIVKNLRVC+DCHAATKLLSKIY RVII+RDRNRFH F +G
Sbjct: 664 SEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREG 723

Query: 182 VCSCQDYW 205
            CSC DYW
Sbjct: 724 YCSCGDYW 731


>emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/68 (80%), Positives = 61/68 (89%)
 Frame = +2

Query: 2   SEKLALAFSLVNTAPGTPIRIVKNLRVCDDCHAATKLLSKIYDRVIIMRDRNRFHRFSKG 181
           SEKLA+AF L++TAP TPIRIVKNLRVC+DCHAATKLLSKIY RVII+RDRNRFH F +G
Sbjct: 704 SEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREG 763

Query: 182 VCSCQDYW 205
            CSC DYW
Sbjct: 764 YCSCGDYW 771


>ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|222858026|gb|EEE95573.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  118 bits (296), Expect = 4e-25
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = +2

Query: 2   SEKLALAFSLVNTAPGTPIRIVKNLRVCDDCHAATKLLSKIYDRVIIMRDRNRFHRFSKG 181
           SEKLA+AF L++TAPGTPIR+VKNLR+CDDCH  TKLLSKIY RVII+RDRNRFH F +G
Sbjct: 638 SEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFREG 697

Query: 182 VCSCQDYW 205
            CSC  YW
Sbjct: 698 SCSCGGYW 705


>ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/68 (77%), Positives = 59/68 (86%)
 Frame = +2

Query: 2   SEKLALAFSLVNTAPGTPIRIVKNLRVCDDCHAATKLLSKIYDRVIIMRDRNRFHRFSKG 181
           SEKLA+A+ L++TAPG PIRIVKNLRVCDDCH ATKLLSKIY R II+RDRNRFH F +G
Sbjct: 734 SEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEG 793

Query: 182 VCSCQDYW 205
            CSC DYW
Sbjct: 794 SCSCCDYW 801


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