BLASTX nr result

ID: Dioscorea21_contig00034716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034716
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC77272.1| hypothetical protein OsI_15901 [Oryza sativa Indi...   132   3e-29
ref|NP_001052802.2| Os04g0425100 [Oryza sativa Japonica Group] g...   130   9e-29
ref|NP_001152214.1| LOC100285852 [Zea mays] gi|195653891|gb|ACG4...   128   5e-28
ref|XP_003577393.1| PREDICTED: uncharacterized protein LOC100845...   128   6e-28
emb|CAE05423.2| OSJNBa0035I04.11 [Oryza sativa Japonica Group]        124   7e-27

>gb|EEC77272.1| hypothetical protein OsI_15901 [Oryza sativa Indica Group]
          Length = 470

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/116 (54%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
 Frame = +3

Query: 3   YFNETSALDPTEDATVTGLASNKSSTHH--SIGNWVQCQEVIYNGADDEGTICGKWRRAP 176
           Y  E S  D    A +T L  +K++T +  SIGNW+QC+E++  G  D+  +CGKWRRAP
Sbjct: 353 YCEEPSEFD---SADLTKLNWSKTNTQYRSSIGNWIQCREILSEGDSDKPVVCGKWRRAP 409

Query: 177 LSVVQTDDWDCSFALPWDPIYADCAVPQELDTDVVLKHLKYIQMVRVRMANSKWKP 344
           L VVQ+DDWDCS  LPWDP +ADCAVPQEL TD VL  LKY++MV+ R+ +   KP
Sbjct: 410 LFVVQSDDWDCSCCLPWDPAHADCAVPQELGTDEVLGQLKYVRMVKNRLVDRNHKP 465


>ref|NP_001052802.2| Os04g0425100 [Oryza sativa Japonica Group]
           gi|255675461|dbj|BAF14716.2| Os04g0425100 [Oryza sativa
           Japonica Group]
          Length = 437

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/116 (54%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
 Frame = +3

Query: 3   YFNETSALDPTEDATVTGLASNKSSTHH--SIGNWVQCQEVIYNGADDEGTICGKWRRAP 176
           Y  E S  D    A +T L  +K++T +  SIGNW+QC E++  G  D+  +CGKWRRAP
Sbjct: 320 YCEEPSEFD---SADLTKLNWSKTNTQYRSSIGNWIQCCEILSEGDSDKPVVCGKWRRAP 376

Query: 177 LSVVQTDDWDCSFALPWDPIYADCAVPQELDTDVVLKHLKYIQMVRVRMANSKWKP 344
           L VVQ+DDWDCS  LPWDP +ADCAVPQEL TD VL  LKY++MV+ R+ +   KP
Sbjct: 377 LFVVQSDDWDCSCCLPWDPAHADCAVPQELGTDEVLGQLKYVRMVKNRLVDRNHKP 432


>ref|NP_001152214.1| LOC100285852 [Zea mays] gi|195653891|gb|ACG46413.1| DNA binding
           protein [Zea mays] gi|414864537|tpg|DAA43094.1| TPA: DNA
           binding protein [Zea mays]
          Length = 440

 Score =  128 bits (322), Expect = 5e-28
 Identities = 57/114 (50%), Positives = 77/114 (67%)
 Frame = +3

Query: 3   YFNETSALDPTEDATVTGLASNKSSTHHSIGNWVQCQEVIYNGADDEGTICGKWRRAPLS 182
           YF+E  A+D  E  T   L    + +H SIGNW+QC+E +  G  D+  +CGKWRRAPL 
Sbjct: 327 YFDEPCAIDSAE-LTTFNLCKMSNQSHSSIGNWIQCRETLNPGDSDKQVVCGKWRRAPLY 385

Query: 183 VVQTDDWDCSFALPWDPIYADCAVPQELDTDVVLKHLKYIQMVRVRMANSKWKP 344
           VVQ+D+WDC   L WDP++ADCAVPQEL T  VLK LK++ M++ ++ +   KP
Sbjct: 386 VVQSDNWDCFCCLLWDPVHADCAVPQELKTSEVLKQLKFVNMLKNQLVDQNQKP 439


>ref|XP_003577393.1| PREDICTED: uncharacterized protein LOC100845731 [Brachypodium
           distachyon]
          Length = 409

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/114 (53%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3   YFNETSALDPTEDATVTGLAS-NKSSTHHSIGNWVQCQEVIYNGADDEGTICGKWRRAPL 179
           YF   S  DP E   V   ++ N++ + +S GNW+QC+EV+  G+D +  ICGKWRRAPL
Sbjct: 295 YFEAPSEFDPAELTKVNWCSTDNQNRSSNSTGNWMQCREVLNTGSD-KPVICGKWRRAPL 353

Query: 180 SVVQTDDWDCSFALPWDPIYADCAVPQELDTDVVLKHLKYIQMVRVRMANSKWK 341
            VVQ+D WDCS  LPWDP+ ADCAVPQELDTD VLK LKY+ +++  +   K K
Sbjct: 354 YVVQSDGWDCSCCLPWDPVRADCAVPQELDTDEVLKQLKYVNVLKKHLVIRKHK 407


>emb|CAE05423.2| OSJNBa0035I04.11 [Oryza sativa Japonica Group]
          Length = 451

 Score =  124 bits (312), Expect = 7e-27
 Identities = 62/116 (53%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
 Frame = +3

Query: 3   YFNETSALDPTEDATVTGLASNKSSTHH--SIGNWVQCQEVIYNGADDEGTICGKWRRAP 176
           Y  E S  D    A +T L  +K++T +  SIGNW+QC E++  G  D+  +CGKWRRAP
Sbjct: 320 YCEEPSEFD---SADLTKLNWSKTNTQYRSSIGNWIQCCEILSEGDSDKPVVCGKWRRAP 376

Query: 177 LSVVQTDDWDCSFALPWDPIYADCAVPQELDTDVVLKHLKYIQMVRVRMANSKWKP 344
           L VVQ+DDWDCS  LPWDP +ADCAVPQEL TD VL  LKY++M    + N  W P
Sbjct: 377 LFVVQSDDWDCSCCLPWDPAHADCAVPQELGTDEVLGQLKYVRM--RSLGNCPWCP 430


Top