BLASTX nr result

ID: Dioscorea21_contig00034697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034697
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding pr...   103   2e-20
emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]   103   2e-20
ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding pr...   102   4e-20
ref|XP_003625734.1| Polyadenylate binding protein [Medicago trun...   100   1e-19
ref|XP_002519416.1| polyadenylate-binding protein, putative [Ric...    99   4e-19

>ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
           vinifera] gi|297740018|emb|CBI30200.3| unnamed protein
           product [Vitis vinifera]
          Length = 634

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/81 (60%), Positives = 58/81 (71%)
 Frame = -1

Query: 245 YVGDLHPDVXXXXXXXXXXXLGPVASVRVCRDSVSGRSLGYGYVNYISPEHASRAIVDLN 66
           YVGDLHPD+              +ASVR+CRDS SGRSL YGYVN+ISP+ AS AI   N
Sbjct: 15  YVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIEAKN 74

Query: 65  HTLLNGKPLRIMWSRRDPDAR 3
           HT+L+GK +R+MWS RDPDAR
Sbjct: 75  HTMLHGKVIRVMWSHRDPDAR 95


>emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
          Length = 544

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/81 (60%), Positives = 58/81 (71%)
 Frame = -1

Query: 245 YVGDLHPDVXXXXXXXXXXXLGPVASVRVCRDSVSGRSLGYGYVNYISPEHASRAIVDLN 66
           YVGDLHPD+              +ASVR+CRDS SGRSL YGYVN+ISP+ AS AI   N
Sbjct: 15  YVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIEAKN 74

Query: 65  HTLLNGKPLRIMWSRRDPDAR 3
           HT+L+GK +R+MWS RDPDAR
Sbjct: 75  HTMLHGKVIRVMWSHRDPDAR 95


>ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Cucumis sativus] gi|449521207|ref|XP_004167621.1|
           PREDICTED: probable polyadenylate-binding protein
           At2g36660-like [Cucumis sativus]
          Length = 640

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/81 (58%), Positives = 59/81 (72%)
 Frame = -1

Query: 245 YVGDLHPDVXXXXXXXXXXXLGPVASVRVCRDSVSGRSLGYGYVNYISPEHASRAIVDLN 66
           YVGDLHPDV              +ASVR+CRDS +GRSL YGYVN+ISP+ A+ AI  +N
Sbjct: 17  YVGDLHPDVTDGQLFDAFSGFKSLASVRICRDSSTGRSLSYGYVNFISPQDATNAIEVMN 76

Query: 65  HTLLNGKPLRIMWSRRDPDAR 3
           H++LNG+ +R+MWSRRD DAR
Sbjct: 77  HSMLNGRAIRVMWSRRDADAR 97


>ref|XP_003625734.1| Polyadenylate binding protein [Medicago truncatula]
           gi|355500749|gb|AES81952.1| Polyadenylate binding
           protein [Medicago truncatula]
          Length = 613

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/81 (59%), Positives = 57/81 (70%)
 Frame = -1

Query: 245 YVGDLHPDVXXXXXXXXXXXLGPVASVRVCRDSVSGRSLGYGYVNYISPEHASRAIVDLN 66
           YVGDLHPD+              +ASVR+CRDS SG+SL YGYVN++SP  A RAI   N
Sbjct: 13  YVGDLHPDLSDSQLHDAFSDFKTLASVRICRDSSSGKSLCYGYVNFLSPHDAIRAIEVKN 72

Query: 65  HTLLNGKPLRIMWSRRDPDAR 3
           H+ LNGK +R+MWSRRDPDAR
Sbjct: 73  HSTLNGKAIRVMWSRRDPDAR 93


>ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223541279|gb|EEF42830.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 632

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/81 (61%), Positives = 56/81 (69%)
 Frame = -1

Query: 245 YVGDLHPDVXXXXXXXXXXXLGPVASVRVCRDSVSGRSLGYGYVNYISPEHASRAIVDLN 66
           YVG+LH DV              +ASVRVCRDS +GRSL YGYVN+ISPE A RAI   N
Sbjct: 16  YVGELHCDVSDGQLVDAFSEFNTLASVRVCRDSSTGRSLCYGYVNFISPEDAIRAIETKN 75

Query: 65  HTLLNGKPLRIMWSRRDPDAR 3
           HT LNGK +R+MWS RDPDAR
Sbjct: 76  HTPLNGKLMRVMWSHRDPDAR 96


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