BLASTX nr result

ID: Dioscorea21_contig00034681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034681
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   280   7e-74
ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   273   1e-71
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              273   1e-71
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   268   3e-70
ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago tr...   266   1e-69

>ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Glycine max]
          Length = 1162

 Score =  280 bits (717), Expect = 7e-74
 Identities = 139/167 (83%), Positives = 152/167 (91%)
 Frame = +3

Query: 3   SIRRSQVPQIKDTLRQLRQKDMLPAIWFIFSRRGCDAAVQYLEDSNLLDECEGVEVELEL 182
           +IRRSQVPQ+ DTL QL+ +DMLPAIWFIFSR+GCDAAVQYLE+  LLDECE  EVEL L
Sbjct: 407 AIRRSQVPQVIDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYLENCKLLDECESSEVELAL 466

Query: 183 KRFRNLYPDAVRDIATRGLLHGIAAHHAGCLPLWKSFIEELFQRGLVKLVFATETLAAGI 362
           KRFR  YPDAVR+ A RGLL G+AAHHAGCLPLWK+FIEELFQRGLVK+VFATETLAAGI
Sbjct: 467 KRFRKQYPDAVRESAVRGLLEGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGI 526

Query: 363 NMPARTAVISSLSKRGEIGRIPLSSNELLQMAGRSGRRGIDDAGHVV 503
           NMPARTAVISSLSKRG+ GRIPLSSNELLQMAGR+GRRGID+ GHVV
Sbjct: 527 NMPARTAVISSLSKRGDSGRIPLSSNELLQMAGRAGRRGIDENGHVV 573


>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  273 bits (697), Expect = 1e-71
 Identities = 136/167 (81%), Positives = 150/167 (89%)
 Frame = +3

Query: 3   SIRRSQVPQIKDTLRQLRQKDMLPAIWFIFSRRGCDAAVQYLEDSNLLDECEGVEVELEL 182
           +IRRSQVPQ+ DTL  L+ +DMLPAIWFIFSR+GCDA+VQYLED NLLDE E  EV+L L
Sbjct: 418 TIRRSQVPQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLAL 477

Query: 183 KRFRNLYPDAVRDIATRGLLHGIAAHHAGCLPLWKSFIEELFQRGLVKLVFATETLAAGI 362
           KRFR  YPDAVR+ A +GLL G+AAHHAGCLPLWKSFIEELFQRGLVK+VFATETLAAGI
Sbjct: 478 KRFRLQYPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 537

Query: 363 NMPARTAVISSLSKRGEIGRIPLSSNELLQMAGRSGRRGIDDAGHVV 503
           NMPARTAVISSLSKRGE GRI LSSNELLQMAGR+GRRGID++GH V
Sbjct: 538 NMPARTAVISSLSKRGESGRIQLSSNELLQMAGRAGRRGIDESGHAV 584


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  273 bits (697), Expect = 1e-71
 Identities = 136/167 (81%), Positives = 150/167 (89%)
 Frame = +3

Query: 3   SIRRSQVPQIKDTLRQLRQKDMLPAIWFIFSRRGCDAAVQYLEDSNLLDECEGVEVELEL 182
           +IRRSQVPQ+ DTL  L+ +DMLPAIWFIFSR+GCDA+VQYLED NLLDE E  EV+L L
Sbjct: 308 TIRRSQVPQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLAL 367

Query: 183 KRFRNLYPDAVRDIATRGLLHGIAAHHAGCLPLWKSFIEELFQRGLVKLVFATETLAAGI 362
           KRFR  YPDAVR+ A +GLL G+AAHHAGCLPLWKSFIEELFQRGLVK+VFATETLAAGI
Sbjct: 368 KRFRLQYPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 427

Query: 363 NMPARTAVISSLSKRGEIGRIPLSSNELLQMAGRSGRRGIDDAGHVV 503
           NMPARTAVISSLSKRGE GRI LSSNELLQMAGR+GRRGID++GH V
Sbjct: 428 NMPARTAVISSLSKRGESGRIQLSSNELLQMAGRAGRRGIDESGHAV 474


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  268 bits (686), Expect = 3e-70
 Identities = 135/167 (80%), Positives = 147/167 (88%)
 Frame = +3

Query: 3   SIRRSQVPQIKDTLRQLRQKDMLPAIWFIFSRRGCDAAVQYLEDSNLLDECEGVEVELEL 182
           +IRRSQVPQI DTL  L+ +DMLPA+WFIFSR+GCDAAVQYLED  LLDECE  EVEL L
Sbjct: 404 NIRRSQVPQIIDTLWHLKARDMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVELAL 463

Query: 183 KRFRNLYPDAVRDIATRGLLHGIAAHHAGCLPLWKSFIEELFQRGLVKLVFATETLAAGI 362
           KRFR  YPDAVR  A +GL  G+AAHHAGCLPLWKSFIEELFQRGLVK+VFATETLAAGI
Sbjct: 464 KRFRIQYPDAVRVSAVKGLRRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 523

Query: 363 NMPARTAVISSLSKRGEIGRIPLSSNELLQMAGRSGRRGIDDAGHVV 503
           NMPARTAVISSLSKRG+ G + LSSNELLQMAGR+GRRGID+ GHVV
Sbjct: 524 NMPARTAVISSLSKRGDSGLVQLSSNELLQMAGRAGRRGIDEKGHVV 570


>ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula]
           gi|355514772|gb|AES96395.1| ATP-dependent RNA helicase
           DOB1 [Medicago truncatula]
          Length = 1201

 Score =  266 bits (681), Expect = 1e-69
 Identities = 132/167 (79%), Positives = 148/167 (88%)
 Frame = +3

Query: 3   SIRRSQVPQIKDTLRQLRQKDMLPAIWFIFSRRGCDAAVQYLEDSNLLDECEGVEVELEL 182
           +IRRSQVPQI DTL  L+ +DMLPA+WFIFSR+GCDAAVQY+ED  LLDECE  EV L L
Sbjct: 441 AIRRSQVPQIIDTLWHLQSRDMLPAVWFIFSRKGCDAAVQYVEDCKLLDECEASEVLLAL 500

Query: 183 KRFRNLYPDAVRDIATRGLLHGIAAHHAGCLPLWKSFIEELFQRGLVKLVFATETLAAGI 362
           KRFR  YPDAVR+ A +GLL G+AAHHAGCLPLWK+FIEELFQRGLVK+VFATETLAAGI
Sbjct: 501 KRFRIQYPDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGI 560

Query: 363 NMPARTAVISSLSKRGEIGRIPLSSNELLQMAGRSGRRGIDDAGHVV 503
           NMPARTAVISSLSKR + GR  L+SNELLQMAGR+GRRGID++GHVV
Sbjct: 561 NMPARTAVISSLSKRSDTGRTLLTSNELLQMAGRAGRRGIDESGHVV 607


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