BLASTX nr result
ID: Dioscorea21_contig00034681
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00034681 (504 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 280 7e-74 ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 273 1e-71 emb|CBI32069.3| unnamed protein product [Vitis vinifera] 273 1e-71 gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth... 268 3e-70 ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago tr... 266 1e-69 >ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like [Glycine max] Length = 1162 Score = 280 bits (717), Expect = 7e-74 Identities = 139/167 (83%), Positives = 152/167 (91%) Frame = +3 Query: 3 SIRRSQVPQIKDTLRQLRQKDMLPAIWFIFSRRGCDAAVQYLEDSNLLDECEGVEVELEL 182 +IRRSQVPQ+ DTL QL+ +DMLPAIWFIFSR+GCDAAVQYLE+ LLDECE EVEL L Sbjct: 407 AIRRSQVPQVIDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYLENCKLLDECESSEVELAL 466 Query: 183 KRFRNLYPDAVRDIATRGLLHGIAAHHAGCLPLWKSFIEELFQRGLVKLVFATETLAAGI 362 KRFR YPDAVR+ A RGLL G+AAHHAGCLPLWK+FIEELFQRGLVK+VFATETLAAGI Sbjct: 467 KRFRKQYPDAVRESAVRGLLEGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGI 526 Query: 363 NMPARTAVISSLSKRGEIGRIPLSSNELLQMAGRSGRRGIDDAGHVV 503 NMPARTAVISSLSKRG+ GRIPLSSNELLQMAGR+GRRGID+ GHVV Sbjct: 527 NMPARTAVISSLSKRGDSGRIPLSSNELLQMAGRAGRRGIDENGHVV 573 >ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like [Vitis vinifera] Length = 1174 Score = 273 bits (697), Expect = 1e-71 Identities = 136/167 (81%), Positives = 150/167 (89%) Frame = +3 Query: 3 SIRRSQVPQIKDTLRQLRQKDMLPAIWFIFSRRGCDAAVQYLEDSNLLDECEGVEVELEL 182 +IRRSQVPQ+ DTL L+ +DMLPAIWFIFSR+GCDA+VQYLED NLLDE E EV+L L Sbjct: 418 TIRRSQVPQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLAL 477 Query: 183 KRFRNLYPDAVRDIATRGLLHGIAAHHAGCLPLWKSFIEELFQRGLVKLVFATETLAAGI 362 KRFR YPDAVR+ A +GLL G+AAHHAGCLPLWKSFIEELFQRGLVK+VFATETLAAGI Sbjct: 478 KRFRLQYPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 537 Query: 363 NMPARTAVISSLSKRGEIGRIPLSSNELLQMAGRSGRRGIDDAGHVV 503 NMPARTAVISSLSKRGE GRI LSSNELLQMAGR+GRRGID++GH V Sbjct: 538 NMPARTAVISSLSKRGESGRIQLSSNELLQMAGRAGRRGIDESGHAV 584 >emb|CBI32069.3| unnamed protein product [Vitis vinifera] Length = 1064 Score = 273 bits (697), Expect = 1e-71 Identities = 136/167 (81%), Positives = 150/167 (89%) Frame = +3 Query: 3 SIRRSQVPQIKDTLRQLRQKDMLPAIWFIFSRRGCDAAVQYLEDSNLLDECEGVEVELEL 182 +IRRSQVPQ+ DTL L+ +DMLPAIWFIFSR+GCDA+VQYLED NLLDE E EV+L L Sbjct: 308 TIRRSQVPQVMDTLWHLKARDMLPAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLAL 367 Query: 183 KRFRNLYPDAVRDIATRGLLHGIAAHHAGCLPLWKSFIEELFQRGLVKLVFATETLAAGI 362 KRFR YPDAVR+ A +GLL G+AAHHAGCLPLWKSFIEELFQRGLVK+VFATETLAAGI Sbjct: 368 KRFRLQYPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 427 Query: 363 NMPARTAVISSLSKRGEIGRIPLSSNELLQMAGRSGRRGIDDAGHVV 503 NMPARTAVISSLSKRGE GRI LSSNELLQMAGR+GRRGID++GH V Sbjct: 428 NMPARTAVISSLSKRGESGRIQLSSNELLQMAGRAGRRGIDESGHAV 474 >gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana] Length = 1159 Score = 268 bits (686), Expect = 3e-70 Identities = 135/167 (80%), Positives = 147/167 (88%) Frame = +3 Query: 3 SIRRSQVPQIKDTLRQLRQKDMLPAIWFIFSRRGCDAAVQYLEDSNLLDECEGVEVELEL 182 +IRRSQVPQI DTL L+ +DMLPA+WFIFSR+GCDAAVQYLED LLDECE EVEL L Sbjct: 404 NIRRSQVPQIIDTLWHLKARDMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVELAL 463 Query: 183 KRFRNLYPDAVRDIATRGLLHGIAAHHAGCLPLWKSFIEELFQRGLVKLVFATETLAAGI 362 KRFR YPDAVR A +GL G+AAHHAGCLPLWKSFIEELFQRGLVK+VFATETLAAGI Sbjct: 464 KRFRIQYPDAVRVSAVKGLRRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGI 523 Query: 363 NMPARTAVISSLSKRGEIGRIPLSSNELLQMAGRSGRRGIDDAGHVV 503 NMPARTAVISSLSKRG+ G + LSSNELLQMAGR+GRRGID+ GHVV Sbjct: 524 NMPARTAVISSLSKRGDSGLVQLSSNELLQMAGRAGRRGIDEKGHVV 570 >ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula] gi|355514772|gb|AES96395.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula] Length = 1201 Score = 266 bits (681), Expect = 1e-69 Identities = 132/167 (79%), Positives = 148/167 (88%) Frame = +3 Query: 3 SIRRSQVPQIKDTLRQLRQKDMLPAIWFIFSRRGCDAAVQYLEDSNLLDECEGVEVELEL 182 +IRRSQVPQI DTL L+ +DMLPA+WFIFSR+GCDAAVQY+ED LLDECE EV L L Sbjct: 441 AIRRSQVPQIIDTLWHLQSRDMLPAVWFIFSRKGCDAAVQYVEDCKLLDECEASEVLLAL 500 Query: 183 KRFRNLYPDAVRDIATRGLLHGIAAHHAGCLPLWKSFIEELFQRGLVKLVFATETLAAGI 362 KRFR YPDAVR+ A +GLL G+AAHHAGCLPLWK+FIEELFQRGLVK+VFATETLAAGI Sbjct: 501 KRFRIQYPDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGI 560 Query: 363 NMPARTAVISSLSKRGEIGRIPLSSNELLQMAGRSGRRGIDDAGHVV 503 NMPARTAVISSLSKR + GR L+SNELLQMAGR+GRRGID++GHVV Sbjct: 561 NMPARTAVISSLSKRSDTGRTLLTSNELLQMAGRAGRRGIDESGHVV 607