BLASTX nr result

ID: Dioscorea21_contig00034660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034660
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...   115   1e-23
emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulga...   109   8e-22
dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like...   108   1e-21
emb|CCA66008.1| hypothetical protein [Beta vulgaris subsp. vulga...   107   3e-21
ref|XP_003592894.1| hypothetical protein MTR_2g005460 [Medicago ...   105   1e-20

>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score =  115 bits (288), Expect = 1e-23
 Identities = 60/203 (29%), Positives = 99/203 (48%)
 Frame = +2

Query: 260 NSQDFVRLDQDTIARARMRFQTALYGKFFGKAPVFDQVKETLLEKWTGLGAFQISDLPNG 439
           + +  + ++++ +      ++  +  K  G+    + +   L + W   G   + DLP  
Sbjct: 73  DGEPVITIEKEVLDAMNGLYKQCMLVKILGRHTTIEVLSRKLRDLWRPTGGMSVLDLPRQ 132

Query: 440 YLLIRCCTEESKQRLMFEGPWAVNGVVLQPFPWRPYFEPAFTKLSSAAIWMQLHNLPVEF 619
           + ++R   EE     +  GPW V G +L    W P F P    + +  +W+++ NLPV F
Sbjct: 133 FFMVRFEVEEDYMMALTGGPWRVLGSILMVQAWSPEFNPLRDVIETTPVWVRVANLPVTF 192

Query: 620 WEGEALETIACIFGRLLKIDEFTSSMSRSKYARICVEVDLSRPLKQGFWIGDEDNRVFVV 799
           +  E L  IA   G+ +K+D  T    R ++AR+CVEV+L  PLK    +  E  R F  
Sbjct: 193 YHNEILLGIAAGLGKPIKVDLTTLRKERGRFARVCVEVNLKNPLKGTLVVNGE--RYF-- 248

Query: 800 VLYERLPTFCYQCGLVGHGASHC 868
           V YE L T C  CG+ GH  ++C
Sbjct: 249 VSYEGLQTICSLCGIYGHTVNNC 271


>emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 744

 Score =  109 bits (273), Expect = 8e-22
 Identities = 58/204 (28%), Positives = 102/204 (50%)
 Frame = +2

Query: 260 NSQDFVRLDQDTIARARMRFQTALYGKFFGKAPVFDQVKETLLEKWTGLGAFQISDLPNG 439
           +SQ  V   ++T+ + R  ++  L GK  G +   + + E +   W      ++ DL + 
Sbjct: 103 DSQLAVSFTKETLWKLREPWRNTLMGKVLGMSISRNFLVERVNRIWKTNDKVEVIDLGHD 162

Query: 440 YLLIRCCTEESKQRLMFEGPWAVNGVVLQPFPWRPYFEPAFTKLSSAAIWMQLHNLPVEF 619
             L +       ++ +F GPW +    L    W+P F P+ +      +W++   LP+E+
Sbjct: 163 VFLFKFNNGNDMEKALFGGPWFILNHYLMLTRWKPDFRPSQSVFDKIMVWIRFPELPLEY 222

Query: 620 WEGEALETIACIFGRLLKIDEFTSSMSRSKYARICVEVDLSRPLKQGFWIGDEDNRVFVV 799
           ++ EAL  IA   G+ +K+D  T  M+R +YAR+C+E+DL++ L    W+     R +  
Sbjct: 223 YDKEALFAIAGKVGKPIKVDYATDHMARGRYARVCIELDLAKALVSKVWVA----RAWQN 278

Query: 800 VLYERLPTFCYQCGLVGHGASHCN 871
           V YE L   C+ CG +GH    C+
Sbjct: 279 VEYENLSLVCFLCGKIGHRRDQCS 302


>dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 591

 Score =  108 bits (271), Expect = 1e-21
 Identities = 62/203 (30%), Positives = 97/203 (47%)
 Frame = +2

Query: 260 NSQDFVRLDQDTIARARMRFQTALYGKFFGKAPVFDQVKETLLEKWTGLGAFQISDLPNG 439
           + +  + + Q+ I      ++  ++ K  G+      V   L E W   GA  + DLP  
Sbjct: 58  DGEPVITIGQEVIDAMNGLWKQCMFVKVLGRKVSLAAVSHRLREMWKPSGAMYVLDLPRH 117

Query: 440 YLLIRCCTEESKQRLMFEGPWAVNGVVLQPFPWRPYFEPAFTKLSSAAIWMQLHNLPVEF 619
           + ++R   EE     +  GPW   G  L    W P F P   ++ +  IW+++ ++PV F
Sbjct: 118 FFMVRFEKEEEFLTALTGGPWRAFGSCLLVKAWSPEFNPLKDEIVTTPIWVRIADMPVSF 177

Query: 620 WEGEALETIACIFGRLLKIDEFTSSMSRSKYARICVEVDLSRPLKQGFWIGDEDNRVFVV 799
           +    L ++A   GR LK+D       R ++AR+CVEVDL RPL QG  + + D      
Sbjct: 178 YHKSILMSVAQGLGRPLKVDLTMLHFERGRFARVCVEVDLKRPL-QGALLVNGDR---YY 233

Query: 800 VLYERLPTFCYQCGLVGHGASHC 868
           V YE L   C +CG+ GH   +C
Sbjct: 234 VAYEGLTNICSKCGIYGHLVHNC 256


>emb|CCA66008.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 678

 Score =  107 bits (268), Expect = 3e-21
 Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 4/211 (1%)
 Frame = +2

Query: 251 LKANSQD----FVRLDQDTIARARMRFQTALYGKFFGKAPVFDQVKETLLEKWTGLGAFQ 418
           L+ +S+D     + L ++   R R  ++ +L  K F +   +D +   L  KW   G   
Sbjct: 110 LECDSEDESCPTIYLTKEEKRRIRHPWRNSLIIKLFDRRLSYDILVRRLKYKWNLKGDIA 169

Query: 419 ISDLPNGYLLIRCCTEESKQRLMFEGPWAVNGVVLQPFPWRPYFEPAFTKLSSAAIWMQL 598
           ++D+ + Y ++R    E    ++ +GPW +    L    W P F      +     W+++
Sbjct: 170 LTDVGHAYYVVRFNNMEDYDFVLTQGPWLIGDSYLTIRKWVPNFVSDQEPIKKLTAWVRI 229

Query: 599 HNLPVEFWEGEALETIACIFGRLLKIDEFTSSMSRSKYARICVEVDLSRPLKQGFWIGDE 778
            +L VE+++ + L +I    G+++KID  T SM R +Y R C+EVDLS+PL   F +   
Sbjct: 230 PHLSVEYFDKQFLHSIGSKIGKVIKIDRNTESMDRGQYVRFCIEVDLSKPLLSKFRL--- 286

Query: 779 DNRVFVVVLYERLPTFCYQCGLVGHGASHCN 871
            N    +V YE L   C++CG +GH    CN
Sbjct: 287 -NGKVWIVQYEGLRLICFKCGHLGHKEDTCN 316


>ref|XP_003592894.1| hypothetical protein MTR_2g005460 [Medicago truncatula]
           gi|92893902|gb|ABE91952.1| Zinc finger, CCHC-type
           [Medicago truncatula] gi|355481942|gb|AES63145.1|
           hypothetical protein MTR_2g005460 [Medicago truncatula]
          Length = 504

 Score =  105 bits (263), Expect = 1e-20
 Identities = 63/230 (27%), Positives = 106/230 (46%)
 Frame = +2

Query: 200 QKSAVSSPLEDGPRLNKLKANSQDFVRLDQDTIARARMRFQTALYGKFFGKAPVFDQVKE 379
           +K  V   LE+G RL          + ++  T       ++ AL  K  GK+  ++ +K+
Sbjct: 55  EKKLVRIELEEGNRLLPK-------IYIEPQTFQELCTPWKDALVVKLLGKSLGYNTMKD 107

Query: 380 TLLEKWTGLGAFQISDLPNGYLLIRCCTEESKQRLMFEGPWAVNGVVLQPFPWRPYFEPA 559
            L + W   G F I D  NG+ +++      K++++  GPW +    L    W P F   
Sbjct: 108 RLQKIWKLQGGFDIMDNDNGFFMVKFDQAADKEKVITGGPWLIFDHCLAVTHWTPEFASP 167

Query: 560 FTKLSSAAIWMQLHNLPVEFWEGEALETIACIFGRLLKIDEFTSSMSRSKYARICVEVDL 739
             K+    +W++   L + +++   L  +A   GR +K+D  T  + R K+AR+CVE+DL
Sbjct: 168 NAKVDRTVVWVRFPGLNLVYYDESFLLAMASALGRPIKVDTNTLKVERGKFARVCVEIDL 227

Query: 740 SRPLKQGFWIGDEDNRVFVVVLYERLPTFCYQCGLVGHGASHCNRRSLGF 889
           + P+    W+    N  +  V YE L   C  CG  GH   +C  +   F
Sbjct: 228 TVPVVGKIWV----NGHWYKVQYEGLHLICTNCGCYGHLGRNCMEKPSTF 273


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