BLASTX nr result

ID: Dioscorea21_contig00034659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034659
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   223   2e-56
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   222   4e-56
gb|ABW74566.1| integrase [Boechera divaricarpa]                       220   1e-55
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   218   8e-55
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   216   2e-54

>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  223 bits (569), Expect = 2e-56
 Identities = 103/184 (55%), Positives = 134/184 (72%)
 Frame = -1

Query: 557  DPRMYRSLIGKLLYLTHTRPDICFPVSYLSRFMHSPSNSHFSAAKRVLRYLSGTRNLGLC 378
            D R + SL+  L+YLTHTRPDI FPV  +SRFMH PS  H  AAKR+LRY+ GT + G+ 
Sbjct: 1033 DARRFXSLVRGLIYLTHTRPDIAFPVEVISRFMHCPSKQHLGAAKRLLRYIVGTYDFGIW 1092

Query: 377  FSRGDEGTLEAFTDSDWAGSVPDRKSTTGMLIRLGKSAVSWSTKKQEIVALSTTEAEYIA 198
            +    E  L  +TDSDWAG + DRKST+G +  LG  AV WS+KKQ + ALS++EAEY A
Sbjct: 1093 YGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYTA 1152

Query: 197  ATSTACQIVWFRRLLQECGIVLKGPTLLWCDNQSTIAIAKNPAHHGRTKHIDVRYHFIRS 18
            ATS+ACQ VW RR+L +     + PT+++CDN++ IA+ KNPA+HGRTKH+D+R HFIR 
Sbjct: 1153 ATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIRD 1212

Query: 17   LVTD 6
            LV +
Sbjct: 1213 LVVE 1216


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  222 bits (565), Expect = 4e-56
 Identities = 102/184 (55%), Positives = 133/184 (72%)
 Frame = -1

Query: 557  DPRMYRSLIGKLLYLTHTRPDICFPVSYLSRFMHSPSNSHFSAAKRVLRYLSGTRNLGLC 378
            D R +RSL+G L+YLTHTRPDI F V  +SRFMH PS  H  AAKR+LRY++GT + G+ 
Sbjct: 1044 DARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFGIW 1103

Query: 377  FSRGDEGTLEAFTDSDWAGSVPDRKSTTGMLIRLGKSAVSWSTKKQEIVALSTTEAEYIA 198
            +    E  L  +TDSDWAG + DRKS +G +  LG  AV WS+KKQ + ALS+ EAEY A
Sbjct: 1104 YGHVQEFKLVGYTDSDWAGCLEDRKSXSGYMFSLGSGAVCWSSKKQAVTALSSXEAEYTA 1163

Query: 197  ATSTACQIVWFRRLLQECGIVLKGPTLLWCDNQSTIAIAKNPAHHGRTKHIDVRYHFIRS 18
            ATS+ CQ VW RR+L +     + PT+++CDN++ IA+ KNPA+HGRTKH+D+R HFIR 
Sbjct: 1164 ATSSXCQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIRD 1223

Query: 17   LVTD 6
            LV +
Sbjct: 1224 LVVE 1227


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  220 bits (561), Expect = 1e-55
 Identities = 104/184 (56%), Positives = 134/184 (72%)
 Frame = -1

Query: 557  DPRMYRSLIGKLLYLTHTRPDICFPVSYLSRFMHSPSNSHFSAAKRVLRYLSGTRNLGLC 378
            D   +RSL+G L+YLTHTRPDICF VS +SRFMH P+  HF AAKR+LRY++ T   GL 
Sbjct: 935  DATKFRSLVGGLIYLTHTRPDICFAVSAISRFMHGPTKQHFGAAKRLLRYIARTAEYGLW 994

Query: 377  FSRGDEGTLEAFTDSDWAGSVPDRKSTTGMLIRLGKSAVSWSTKKQEIVALSTTEAEYIA 198
            +    +  L  FTDSDWAG V DRKST+G +  LG  AV WS+KKQ + ALS++EAEY A
Sbjct: 995  YCSVSKFKLVGFTDSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQNVTALSSSEAEYTA 1054

Query: 197  ATSTACQIVWFRRLLQECGIVLKGPTLLWCDNQSTIAIAKNPAHHGRTKHIDVRYHFIRS 18
            AT+ ACQ VW RR+L +     +  T ++CDN++TIA+ KNPA+HGRTKHI ++ HFIR 
Sbjct: 1055 ATAAACQAVWLRRILADIKQEQEKATTIFCDNKATIAMNKNPAYHGRTKHISIKVHFIRD 1114

Query: 17   LVTD 6
            LV++
Sbjct: 1115 LVSE 1118


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  218 bits (554), Expect = 8e-55
 Identities = 100/184 (54%), Positives = 133/184 (72%)
 Frame = -1

Query: 557  DPRMYRSLIGKLLYLTHTRPDICFPVSYLSRFMHSPSNSHFSAAKRVLRYLSGTRNLGLC 378
            D R +RSL+G L+YLTHTRPD  F V  +SRFMH PS  H  AAKR+LRY++GT +  + 
Sbjct: 953  DARRFRSLVGGLIYLTHTRPDXAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFRIW 1012

Query: 377  FSRGDEGTLEAFTDSDWAGSVPDRKSTTGMLIRLGKSAVSWSTKKQEIVALSTTEAEYIA 198
            +    E  L  +TDSDWAG + DRKST+G +  LG  AV WS+KKQ + ALS++EAEY A
Sbjct: 1013 YGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYTA 1072

Query: 197  ATSTACQIVWFRRLLQECGIVLKGPTLLWCDNQSTIAIAKNPAHHGRTKHIDVRYHFIRS 18
            ATS+ACQ VW RR+L +     +  T+++CDN++ IA+ KNPA+HGRTKH+++R HFIR 
Sbjct: 1073 ATSSACQAVWLRRILVDINQEHEEXTVIYCDNKAAIAMTKNPAYHGRTKHVBIRVHFIRD 1132

Query: 17   LVTD 6
            LV +
Sbjct: 1133 LVVE 1136


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  216 bits (550), Expect = 2e-54
 Identities = 104/198 (52%), Positives = 142/198 (71%)
 Frame = -1

Query: 599  VSDRSQKITDDAPCDPRMYRSLIGKLLYLTHTRPDICFPVSYLSRFMHSPSNSHFSAAKR 420
            ++++ Q+       +P+++RSL+G L YLTHTRPDI F VS +SRF+ SP+  HF AAKR
Sbjct: 1090 INEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVSVVSRFLQSPTKQHFGAAKR 1149

Query: 419  VLRYLSGTRNLGLCFSRGDEGTLEAFTDSDWAGSVPDRKSTTGMLIRLGKSAVSWSTKKQ 240
            VLRY++GT + G+ +S+     L  FTDSD+AG + DRKST+G     G   V+WS+KKQ
Sbjct: 1150 VLRYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKSTSGSCFSFGSGVVTWSSKKQ 1209

Query: 239  EIVALSTTEAEYIAATSTACQIVWFRRLLQECGIVLKGPTLLWCDNQSTIAIAKNPAHHG 60
            E VALST+EAEY AA+  A Q +W R+LL++     K  T ++ D++S IA+AKNP+ HG
Sbjct: 1210 ETVALSTSEAEYTAASLAARQALWLRKLLEDFSYEQKESTEIFSDSKSAIAMAKNPSFHG 1269

Query: 59   RTKHIDVRYHFIRSLVTD 6
            RTKHIDV+YHFIR+LV D
Sbjct: 1270 RTKHIDVQYHFIRTLVAD 1287


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