BLASTX nr result

ID: Dioscorea21_contig00034633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034633
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532371.1| conserved hypothetical protein [Ricinus comm...    85   7e-15
ref|XP_002307639.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_002300782.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplasti...    79   3e-13
emb|CBI37094.3| unnamed protein product [Vitis vinifera]               79   3e-13

>ref|XP_002532371.1| conserved hypothetical protein [Ricinus communis]
           gi|223527927|gb|EEF30014.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 578

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/133 (35%), Positives = 73/133 (54%)
 Frame = +3

Query: 3   DGRVKPFCEKTTAKRCLSDEACDSEIKDQQMRQTGFEKRQEMLACLPNLFNMIRLIFRSV 182
           DG +     ++  +     E    E +D  + Q   ++R++M+ACLP LFN++   F+S+
Sbjct: 448 DGDILKILPESLLQSIREKERKAQEERDPAISQA--KRRRQMIACLPKLFNLMHFFFQSI 505

Query: 183 NCSFITKKELIHKIITIDLEIEDSXXXXXXXXXXXXXXPDWISKKTETTGDFLYSINNTV 362
           N S +TK+EL+HKII    +I D               P+WISKK  T+GD L+ IN   
Sbjct: 506 NRSVLTKEELMHKIIAGHSDIVDRREVEEQLDLLLELVPEWISKKLATSGDSLFCINKMS 565

Query: 363 NLDLVRARLLEAQ 401
           + + +RARL EA+
Sbjct: 566 SPETIRARLEEAK 578


>ref|XP_002307639.1| predicted protein [Populus trichocarpa] gi|222857088|gb|EEE94635.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/97 (42%), Positives = 60/97 (61%)
 Frame = +3

Query: 111 EKRQEMLACLPNLFNMIRLIFRSVNCSFITKKELIHKIITIDLEIEDSXXXXXXXXXXXX 290
           +KR++M+ACLP LFN I  +F+S+  S +TK+ELIHKII    +I D             
Sbjct: 468 KKRRQMIACLPKLFNKIHFLFQSIRQSVLTKEELIHKIIASHSDIADRREVDEQLNLLLE 527

Query: 291 XXPDWISKKTETTGDFLYSINNTVNLDLVRARLLEAQ 401
             P+WIS+K  ++GD ++ IN   + + VRARL EA+
Sbjct: 528 LVPEWISEKLASSGDSIFRINKMYSPETVRARLEEAK 564


>ref|XP_002300782.1| predicted protein [Populus trichocarpa] gi|222842508|gb|EEE80055.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/96 (41%), Positives = 59/96 (61%)
 Frame = +3

Query: 111 EKRQEMLACLPNLFNMIRLIFRSVNCSFITKKELIHKIITIDLEIEDSXXXXXXXXXXXX 290
           ++R++M+ACLP LFN I  +F+S+  S +TK+ELIHKII    +I D             
Sbjct: 280 KRRRQMIACLPKLFNKIHFLFQSIKQSVLTKEELIHKIIASHSDIADRREVEEQLNLLLE 339

Query: 291 XXPDWISKKTETTGDFLYSINNTVNLDLVRARLLEA 398
             P+WIS+K  ++GD L+ IN   + + VRA+L EA
Sbjct: 340 LVPEWISEKLASSGDLLFRINKLYSPETVRAQLEEA 375


>ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Vitis vinifera]
          Length = 646

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/108 (37%), Positives = 64/108 (59%)
 Frame = +3

Query: 78  IKDQQMRQTGFEKRQEMLACLPNLFNMIRLIFRSVNCSFITKKELIHKIITIDLEIEDSX 257
           I++Q    +  ++R+EM+  LP LFNMI  +F+S+N S +TK+EL+HKI+    +I D  
Sbjct: 539 IEEQDPAISQAKRRREMIVGLPKLFNMIHFLFQSINRSVVTKEELMHKILASHCDIVDRR 598

Query: 258 XXXXXXXXXXXXXPDWISKKTETTGDFLYSINNTVNLDLVRARLLEAQ 401
                        P+WIS+K  ++GD L  I  T + + +R RL+EA+
Sbjct: 599 EVEEQLKLLQELVPEWISEKLASSGDLLLCIKKTSSPESIRQRLMEAK 646


>emb|CBI37094.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/108 (37%), Positives = 64/108 (59%)
 Frame = +3

Query: 78  IKDQQMRQTGFEKRQEMLACLPNLFNMIRLIFRSVNCSFITKKELIHKIITIDLEIEDSX 257
           I++Q    +  ++R+EM+  LP LFNMI  +F+S+N S +TK+EL+HKI+    +I D  
Sbjct: 511 IEEQDPAISQAKRRREMIVGLPKLFNMIHFLFQSINRSVVTKEELMHKILASHCDIVDRR 570

Query: 258 XXXXXXXXXXXXXPDWISKKTETTGDFLYSINNTVNLDLVRARLLEAQ 401
                        P+WIS+K  ++GD L  I  T + + +R RL+EA+
Sbjct: 571 EVEEQLKLLQELVPEWISEKLASSGDLLLCIKKTSSPESIRQRLMEAK 618


Top