BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034609
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621545.1| Pentatricopeptide repeat-containing protein ...   253   2e-65
ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containi...   252   3e-65
ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containi...   251   4e-65
emb|CBI27634.3| unnamed protein product [Vitis vinifera]              250   1e-64
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...   250   1e-64

>ref|XP_003621545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|87241489|gb|ABD33347.1| Pentatricopeptide repeat
            [Medicago truncatula] gi|355496560|gb|AES77763.1|
            Pentatricopeptide repeat-containing protein [Medicago
            truncatula]
          Length = 791

 Score =  253 bits (645), Expect = 2e-65
 Identities = 116/162 (71%), Positives = 144/162 (88%)
 Frame = -2

Query: 561  PVSYTYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAV 382
            PVSYTYNS++SSFVKKGY   AW +L EMG+KLCP DIATYN++IQGLGKMG ADLASAV
Sbjct: 618  PVSYTYNSIMSSFVKKGYFNEAWAILSEMGEKLCPTDIATYNMIIQGLGKMGRADLASAV 677

Query: 381  LEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAK 202
            L+ LLK+GG+LDIVMYNT+ NALGKAGRI++VNK F+QM  SGINPDVVT+NTLIE+H+K
Sbjct: 678  LDGLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIEIHSK 737

Query: 201  AGKIEGAHKFLRKMLAAGCSPNHVTDTILDFLEQEVEKLKKQ 76
            AG+++ A+KFL+ M+ AGC+PNHVTDT LD+L +E++KL+ Q
Sbjct: 738  AGRLKDAYKFLKMMIDAGCTPNHVTDTTLDYLVREIDKLRYQ 779



 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 42/149 (28%), Positives = 68/149 (45%)
 Frame = -2

Query: 561 PVSYTYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAV 382
           P  +TY  L+    +   M VA  +  EM D      +  YN V+ GL K  + +    +
Sbjct: 308 PDEFTYTILVRGCCRTYRMDVALRIFNEMKDNGFRPGVLVYNCVLDGLFKAAKVNEGCQM 367

Query: 381 LEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAK 202
            E++ ++G       YN + + L K GR E    LF  +   G   D +T++ ++    K
Sbjct: 368 FEKMAQEGVKASCSTYNILIHGLIKNGRSEAGYMLFCDLKKKGQFVDGITYSIVVLQLCK 427

Query: 201 AGKIEGAHKFLRKMLAAGCSPNHVTDTIL 115
            G +E A + + +M A G S + VT T L
Sbjct: 428 EGLLEEALELVEEMEARGFSVDLVTITSL 456



 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 35/132 (26%), Positives = 64/132 (48%)
 Frame = -2

Query: 561 PVSYTYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAV 382
           P    YN +L    K   +     + ++M  +   A  +TYN++I GL K G ++    +
Sbjct: 343 PGVLVYNCVLDGLFKAAKVNEGCQMFEKMAQEGVKASCSTYNILIHGLIKNGRSEAGYML 402

Query: 381 LEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAK 202
              L KKG  +D + Y+ +   L K G +E+  +L ++M   G + D+VT  +L+    K
Sbjct: 403 FCDLKKKGQFVDGITYSIVVLQLCKEGLLEEALELVEEMEARGFSVDLVTITSLLIGIHK 462

Query: 201 AGKIEGAHKFLR 166
            G+ E   + ++
Sbjct: 463 YGRWEWTDRLIK 474



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/149 (24%), Positives = 70/149 (46%)
 Frame = -2

Query: 561 PVSYTYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAV 382
           P   TYNS+LS   K G +  A  V  E+       D  TY ++++G  +    D+A  +
Sbjct: 273 PDMCTYNSVLSVLCKVGKINDALIVWDELKGCGYEPDEFTYTILVRGCCRTYRMDVALRI 332

Query: 381 LEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAK 202
             ++   G    +++YN + + L KA ++ +  ++F++M   G+     T+N LI    K
Sbjct: 333 FNEMKDNGFRPGVLVYNCVLDGLFKAAKVNEGCQMFEKMAQEGVKASCSTYNILIHGLIK 392

Query: 201 AGKIEGAHKFLRKMLAAGCSPNHVTDTIL 115
            G+ E  +     +   G   + +T +I+
Sbjct: 393 NGRSEAGYMLFCDLKKKGQFVDGITYSIV 421


>ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
            [Glycine max]
          Length = 768

 Score =  252 bits (643), Expect = 3e-65
 Identities = 117/162 (72%), Positives = 144/162 (88%)
 Frame = -2

Query: 561  PVSYTYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAV 382
            PVSYTYNS++SSFVKKGY   AW +L EMG+K CP DIATYN++IQGLGKMG ADLASAV
Sbjct: 595  PVSYTYNSIMSSFVKKGYFAEAWAILTEMGEKFCPTDIATYNMIIQGLGKMGRADLASAV 654

Query: 381  LEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAK 202
            L++LL++GG+LDIVMYNT+ NALGKA RI++VNKLF+QM  SGINPDVVT+NTLIEVH+K
Sbjct: 655  LDRLLRQGGYLDIVMYNTLINALGKASRIDEVNKLFEQMRSSGINPDVVTYNTLIEVHSK 714

Query: 201  AGKIEGAHKFLRKMLAAGCSPNHVTDTILDFLEQEVEKLKKQ 76
            AG+++ A+KFL+ ML AGCSPNHVTDT LD+L +E++KL+ Q
Sbjct: 715  AGRLKDAYKFLKMMLDAGCSPNHVTDTTLDYLGREIDKLRYQ 756



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/145 (26%), Positives = 69/145 (47%)
 Frame = -2

Query: 549 TYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAVLEQL 370
           TYNSL+++  + G +  A  V +E+       D  TY  +IQ   K    + A  +  Q+
Sbjct: 252 TYNSLITALCRLGKVDDAITVYEELNGSAHQPDRFTYTNLIQACSKTYRMEDAIRIFNQM 311

Query: 369 LKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAKAGKI 190
              G   D + YN++ +   KA ++ +  +LF++M   G+ P   T+N LI    + G+ 
Sbjct: 312 QSNGFRPDTLAYNSLLDGHFKATKVMEACQLFEKMVQEGVRPSCWTYNILIHGLFRNGRA 371

Query: 189 EGAHKFLRKMLAAGCSPNHVTDTIL 115
           E A+     +   G   + +T +I+
Sbjct: 372 EAAYTMFCDLKKKGQFVDGITYSIV 396



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
 Frame = -2

Query: 561 PVSYTYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAV 382
           P +  YNSLL    K   +  A  + ++M  +       TYN++I GL + G A+ A  +
Sbjct: 318 PDTLAYNSLLDGHFKATKVMEACQLFEKMVQEGVRPSCWTYNILIHGLFRNGRAEAAYTM 377

Query: 381 LEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNT-LIEVH 208
              L KKG  +D + Y+ +   L K G++E+  +L ++M   G   D+VT  + LI +H
Sbjct: 378 FCDLKKKGQFVDGITYSIVVLQLCKEGQLEEALQLVEEMESRGFVVDLVTITSLLISIH 436


>ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
            [Cucumis sativus] gi|449523383|ref|XP_004168703.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g01570-like [Cucumis sativus]
          Length = 803

 Score =  251 bits (642), Expect = 4e-65
 Identities = 120/172 (69%), Positives = 147/172 (85%), Gaps = 2/172 (1%)
 Frame = -2

Query: 561  PVSYTYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAV 382
            PV YTYNS+LSSFVKKGY   AWG+  EMG+ +CPADIATYN++IQGLGKMG ADLAS+V
Sbjct: 631  PVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLASSV 690

Query: 381  LEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAK 202
            LE+L+++GG+LDIVMYNT+ NALGKAGR++ VNKLF QM  SGINPDVVTFNTLIEVH+K
Sbjct: 691  LEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSK 750

Query: 201  AGKIEGAHKFLRKMLAAGCSPNHVTDTILDFLEQEVEKLK--KQMVTHDKDS 52
            AG+++ A+KFL+ ML +GCSPNHVTDT LDFL +E+EK +  K  +  DK+S
Sbjct: 751  AGRLKDAYKFLKMMLDSGCSPNHVTDTTLDFLGREMEKARYEKASIIRDKNS 802



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
 Frame = -2

Query: 552 YTYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPA-----DIATYNLVIQGLGKMGEADLAS 388
           Y YN  + +F   GY+  A  + +EM +K   +     D+ TYN +I  L  +G+   A 
Sbjct: 246 YGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDAL 305

Query: 387 AVLEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVH 208
            V E+L   G   D   Y  +     K+ R++    +F +M  +G+ PD + +N+L+   
Sbjct: 306 IVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGL 365

Query: 207 AKAGKIEGAHKFLRKML 157
            KA K+  A +   KM+
Sbjct: 366 FKARKVTEACQLFDKMV 382



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/142 (27%), Positives = 68/142 (47%)
 Frame = -2

Query: 561 PVSYTYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAV 382
           P +  YNSLL+   K   +  A  +  +M  +   A   TYN++I GL + G A+    +
Sbjct: 353 PDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTL 412

Query: 381 LEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAK 202
              L KKG  +D V Y+ +   L K   +E+  +L ++M   G   D++T  +L+    K
Sbjct: 413 FCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLLIAMHK 472

Query: 201 AGKIEGAHKFLRKMLAAGCSPN 136
            G+ +G  + ++ +      PN
Sbjct: 473 QGQWDGLERLMKHIREGDLVPN 494



 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 39/145 (26%), Positives = 69/145 (47%)
 Frame = -2

Query: 549 TYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAVLEQL 370
           TYNS++      G +K A  V +E+       D  TY ++IQG  K    D A+ +  ++
Sbjct: 287 TYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEM 346

Query: 369 LKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAKAGKI 190
              G   D ++YN++ N L KA ++ +  +LF +M    +     T+N LI+   + G+ 
Sbjct: 347 EYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRA 406

Query: 189 EGAHKFLRKMLAAGCSPNHVTDTIL 115
           E  +     +   G   + VT +I+
Sbjct: 407 EAGYTLFCDLKKKGQIVDAVTYSII 431


>emb|CBI27634.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  250 bits (638), Expect = 1e-64
 Identities = 116/160 (72%), Positives = 141/160 (88%)
 Frame = -2

Query: 561 PVSYTYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAV 382
           PV YTYNS++++FVKKGY   AWGV  EMG+K+CP DIATYN++IQGLGKMG ADLASAV
Sbjct: 181 PVIYTYNSMMTAFVKKGYFNEAWGVFHEMGEKVCPPDIATYNVIIQGLGKMGRADLASAV 240

Query: 381 LEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAK 202
           L+ L+K+GG+LDIVMYNT+ NALGKAGRI++  KLF+QM  SGINPDVVTFNTLIE+HAK
Sbjct: 241 LDMLMKQGGYLDIVMYNTLINALGKAGRIDEATKLFEQMRSSGINPDVVTFNTLIEIHAK 300

Query: 201 AGKIEGAHKFLRKMLAAGCSPNHVTDTILDFLEQEVEKLK 82
           AG+++ A+KFL+ ML AGCSPNHVTDT LDFL +E+EKL+
Sbjct: 301 AGQLKAAYKFLKLMLDAGCSPNHVTDTTLDFLGKEIEKLR 340


>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
            [Vitis vinifera]
          Length = 792

 Score =  250 bits (638), Expect = 1e-64
 Identities = 116/160 (72%), Positives = 141/160 (88%)
 Frame = -2

Query: 561  PVSYTYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAV 382
            PV YTYNS++++FVKKGY   AWGV  EMG+K+CP DIATYN++IQGLGKMG ADLASAV
Sbjct: 618  PVIYTYNSMMTAFVKKGYFNEAWGVFHEMGEKVCPPDIATYNVIIQGLGKMGRADLASAV 677

Query: 381  LEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAK 202
            L+ L+K+GG+LDIVMYNT+ NALGKAGRI++  KLF+QM  SGINPDVVTFNTLIE+HAK
Sbjct: 678  LDMLMKQGGYLDIVMYNTLINALGKAGRIDEATKLFEQMRSSGINPDVVTFNTLIEIHAK 737

Query: 201  AGKIEGAHKFLRKMLAAGCSPNHVTDTILDFLEQEVEKLK 82
            AG+++ A+KFL+ ML AGCSPNHVTDT LDFL +E+EKL+
Sbjct: 738  AGQLKAAYKFLKLMLDAGCSPNHVTDTTLDFLGKEIEKLR 777



 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
 Frame = -2

Query: 546 YNSLLSSFVKKGYMKVAWGVLQEMGDKLCPA-----DIATYNLVIQGLGKMGEADLASAV 382
           YN  + +F   G +  A  + +EM DK   +     D+ TYN +I+ L  +G+   A  V
Sbjct: 235 YNICIHAFGCWGDLGTALNLFKEMKDKSLNSSSFGPDLCTYNSLIRVLCLVGKVKDALIV 294

Query: 381 LEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAK 202
            E+L   G   D   Y  +     K+ R++   ++F +M  +G  PD + +NTL++   K
Sbjct: 295 WEELKGSGHEPDAFTYRILIQGCSKSYRMDDAMRIFNEMQYNGFCPDTIVYNTLLDGLFK 354

Query: 201 AGKIEGAHKFLRKMLAAGCSPNHVTDTIL 115
           A K+  A +   KM+  G   +  T  I+
Sbjct: 355 ARKVMEACQVFEKMVEDGVRASCWTHNIV 383



 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 38/142 (26%), Positives = 68/142 (47%)
 Frame = -2

Query: 561 PVSYTYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAV 382
           P +  YN+LL    K   +  A  V ++M +    A   T+N+VI GL + G A     +
Sbjct: 340 PDTIVYNTLLDGLFKARKVMEACQVFEKMVEDGVRASCWTHNIVICGLFRNGRAAAGYTL 399

Query: 381 LEQLLKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLIEVHAK 202
              L KKG  +D + Y+ +   L + G++E+  +L ++M   G   D+VT  +L+    K
Sbjct: 400 FCDLKKKGKFVDGITYSIVVLQLCREGQLEEALQLVEEMEARGFVVDLVTITSLLIGFHK 459

Query: 201 AGKIEGAHKFLRKMLAAGCSPN 136
            G+ +   + ++ +      PN
Sbjct: 460 QGRWDWTERLMKHIRDGNLVPN 481



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 33/111 (29%), Positives = 55/111 (49%)
 Frame = -2

Query: 549 TYNSLLSSFVKKGYMKVAWGVLQEMGDKLCPADIATYNLVIQGLGKMGEADLASAVLEQL 370
           TYNSL+      G +K A  V +E+       D  TY ++IQG  K    D A  +  ++
Sbjct: 274 TYNSLIRVLCLVGKVKDALIVWEELKGSGHEPDAFTYRILIQGCSKSYRMDDAMRIFNEM 333

Query: 369 LKKGGHLDIVMYNTMFNALGKAGRIEQVNKLFKQMTGSGINPDVVTFNTLI 217
              G   D ++YNT+ + L KA ++ +  ++F++M   G+     T N +I
Sbjct: 334 QYNGFCPDTIVYNTLLDGLFKARKVMEACQVFEKMVEDGVRASCWTHNIVI 384