BLASTX nr result

ID: Dioscorea21_contig00034587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034587
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
emb|CBI15839.3| unnamed protein product [Vitis vinifera]              125   4e-27
ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selag...   100   2e-19
ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    99   3e-19
ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat...    99   3e-19

>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/86 (68%), Positives = 71/86 (82%)
 Frame = -1

Query: 259 FLSNVYAASKRWVDVEKCRRIMIEKGVRKIPGCSSIELNNIVHEFVAGDTSHPQFKKINA 80
           FLSN+YA+  RW DV  CR++MI++GV K PGCSSIE+NNIVHEFVAGDTSHPQF +INA
Sbjct: 413 FLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINA 472

Query: 79  FLVEIDKELRKLGYRPDVDSVLHDIE 2
           FL EI KEL+  G+ P+  +VLHDIE
Sbjct: 473 FLDEIAKELKGQGHVPNTANVLHDIE 498


>emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/86 (68%), Positives = 71/86 (82%)
 Frame = -1

Query: 259 FLSNVYAASKRWVDVEKCRRIMIEKGVRKIPGCSSIELNNIVHEFVAGDTSHPQFKKINA 80
           FLSN+YA+  RW DV  CR++MI++GV K PGCSSIE+NNIVHEFVAGDTSHPQF +INA
Sbjct: 341 FLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINA 400

Query: 79  FLVEIDKELRKLGYRPDVDSVLHDIE 2
           FL EI KEL+  G+ P+  +VLHDIE
Sbjct: 401 FLDEIAKELKGQGHVPNTANVLHDIE 426


>ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
           gi|300164291|gb|EFJ30900.1| hypothetical protein
           SELMODRAFT_88824 [Selaginella moellendorffii]
          Length = 670

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/85 (55%), Positives = 65/85 (76%)
 Frame = -1

Query: 256 LSNVYAASKRWVDVEKCRRIMIEKGVRKIPGCSSIELNNIVHEFVAGDTSHPQFKKINAF 77
           LSN+YAA+ RW DVEK R+IM  +GV+K PG S IE+ ++VHEFV+GD+SHPQ ++I   
Sbjct: 507 LSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVE 566

Query: 76  LVEIDKELRKLGYRPDVDSVLHDIE 2
           L ++ +E++ LGY PD  SV HD+E
Sbjct: 567 LGKMVEEMKGLGYVPDTSSVFHDLE 591


>ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/84 (53%), Positives = 62/84 (73%)
 Frame = -1

Query: 256 LSNVYAASKRWVDVEKCRRIMIEKGVRKIPGCSSIELNNIVHEFVAGDTSHPQFKKINAF 77
           L N+YAA KRW D+ + R++M++KG++K PGCS IE+N  VHEFVAGD SHPQ K I+A 
Sbjct: 581 LCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAK 640

Query: 76  LVEIDKELRKLGYRPDVDSVLHDI 5
           L ++ ++L+  GY PD+  V  DI
Sbjct: 641 LDKMTQDLKLAGYSPDISEVFLDI 664


>ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/84 (53%), Positives = 62/84 (73%)
 Frame = -1

Query: 256 LSNVYAASKRWVDVEKCRRIMIEKGVRKIPGCSSIELNNIVHEFVAGDTSHPQFKKINAF 77
           L N+YAA KRW D+ + R++M++KG++K PGCS IE+N  VHEFVAGD SHPQ K I+A 
Sbjct: 560 LCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAK 619

Query: 76  LVEIDKELRKLGYRPDVDSVLHDI 5
           L ++ ++L+  GY PD+  V  DI
Sbjct: 620 LDKMTQDLKLAGYSPDISEVFLDI 643


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