BLASTX nr result
ID: Dioscorea21_contig00034575
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00034575
(268 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containi... 135 3e-30
ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group] g... 134 1e-29
gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japo... 134 1e-29
gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indi... 134 1e-29
tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays] 133 2e-29
>ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 135 bits (340), Expect = 3e-30
Identities = 63/89 (70%), Positives = 74/89 (83%)
Frame = -1
Query: 268 ARDARRVFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNT 89
A+DA R+F EL ++GF PDAVTYN+LLYAFA++GD + VERVCE++V AGFKKD ITYNT
Sbjct: 186 AQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNT 245
Query: 88 MIHMYGKMGMLDLVVELYREMREDGCNPD 2
MIHMYGKMG LDL + LY EMR GC PD
Sbjct: 246 MIHMYGKMGRLDLALGLYDEMRALGCTPD 274
Score = 63.9 bits (154), Expect = 1e-08
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = -1
Query: 262 DARRVFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNTMI 83
DA +V +E+ G P VT++AL+ A+A+ G EE R MV +G K D + Y M+
Sbjct: 293 DAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVML 352
Query: 82 HMYGKMGMLDLVVELYREMREDGCNPD 2
+ + G + ++ LY+ M DG PD
Sbjct: 353 DIIARSGDMRKLMALYQTMMNDGYRPD 379
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/83 (31%), Positives = 44/83 (53%)
Frame = -1
Query: 250 VFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNTMIHMYG 71
++DE+ G +PDAVTY L+ + + + + +V E+M +AG K +T++ +I Y
Sbjct: 262 LYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYA 321
Query: 70 KMGMLDLVVELYREMREDGCNPD 2
K G + V + M G PD
Sbjct: 322 KGGRREEAVRTFSHMVASGVKPD 344
>ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza
sativa Japonica Group] gi|113595105|dbj|BAF18979.1|
Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 134 bits (336), Expect = 1e-29
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = -1
Query: 268 ARDARRVFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNT 89
A++A +F EL ++GF PDAVTYN+LLYAFA++GDVE VERVCE++V AGF+KD ITYNT
Sbjct: 184 AQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNT 243
Query: 88 MIHMYGKMGMLDLVVELYREMREDGCNPD 2
MIHMYGKMG LDL + LY EMR GC PD
Sbjct: 244 MIHMYGKMGRLDLALGLYDEMRAIGCTPD 272
Score = 64.3 bits (155), Expect = 1e-08
Identities = 29/87 (33%), Positives = 51/87 (58%)
Frame = -1
Query: 262 DARRVFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNTMI 83
+A +V +E+ G P VT++AL+ A+A+ G ++ ER ++MV +G K D + Y M+
Sbjct: 291 EAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVML 350
Query: 82 HMYGKMGMLDLVVELYREMREDGCNPD 2
++ + ++ LYR M +DG PD
Sbjct: 351 DVFARSDETRKLMVLYRAMIKDGYKPD 377
Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = -1
Query: 250 VFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNTMIHMYG 71
++DE+ G +PDAVTY L+ + + + E +V E+M +AG K +T++ +I Y
Sbjct: 260 LYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYA 319
Query: 70 KMGMLDLVVELYREMREDGCNPD 2
K G D + M E G PD
Sbjct: 320 KSGRQDDAERTFDRMVESGVKPD 342
>gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 134 bits (336), Expect = 1e-29
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = -1
Query: 268 ARDARRVFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNT 89
A++A +F EL ++GF PDAVTYN+LLYAFA++GDVE VERVCE++V AGF+KD ITYNT
Sbjct: 344 AQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNT 403
Query: 88 MIHMYGKMGMLDLVVELYREMREDGCNPD 2
MIHMYGKMG LDL + LY EMR GC PD
Sbjct: 404 MIHMYGKMGRLDLALGLYDEMRAIGCTPD 432
Score = 64.3 bits (155), Expect = 1e-08
Identities = 29/87 (33%), Positives = 51/87 (58%)
Frame = -1
Query: 262 DARRVFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNTMI 83
+A +V +E+ G P VT++AL+ A+A+ G ++ ER ++MV +G K D + Y M+
Sbjct: 451 EAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVML 510
Query: 82 HMYGKMGMLDLVVELYREMREDGCNPD 2
++ + ++ LYR M +DG PD
Sbjct: 511 DVFARSDETRKLMVLYRAMIKDGYKPD 537
Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = -1
Query: 250 VFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNTMIHMYG 71
++DE+ G +PDAVTY L+ + + + E +V E+M +AG K +T++ +I Y
Sbjct: 420 LYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYA 479
Query: 70 KMGMLDLVVELYREMREDGCNPD 2
K G D + M E G PD
Sbjct: 480 KSGRQDDAERTFDRMVESGVKPD 502
>gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 134 bits (336), Expect = 1e-29
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = -1
Query: 268 ARDARRVFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNT 89
A++A +F EL ++GF PDAVTYN+LLYAFA++GDVE VERVCE++V AGF+KD ITYNT
Sbjct: 117 AQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNT 176
Query: 88 MIHMYGKMGMLDLVVELYREMREDGCNPD 2
MIHMYGKMG LDL + LY EMR GC PD
Sbjct: 177 MIHMYGKMGRLDLALGLYDEMRAIGCTPD 205
Score = 64.3 bits (155), Expect = 1e-08
Identities = 29/87 (33%), Positives = 51/87 (58%)
Frame = -1
Query: 262 DARRVFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNTMI 83
+A +V +E+ G P VT++AL+ A+A+ G ++ ER ++MV +G K D + Y M+
Sbjct: 224 EAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVML 283
Query: 82 HMYGKMGMLDLVVELYREMREDGCNPD 2
++ + ++ LYR M +DG PD
Sbjct: 284 DVFARSDETRKLMVLYRAMIKDGYKPD 310
Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = -1
Query: 250 VFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNTMIHMYG 71
++DE+ G +PDAVTY L+ + + + E +V E+M +AG K +T++ +I Y
Sbjct: 193 LYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYA 252
Query: 70 KMGMLDLVVELYREMREDGCNPD 2
K G D + M E G PD
Sbjct: 253 KSGRQDDAERTFDRMVESGVKPD 275
>tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 133 bits (334), Expect = 2e-29
Identities = 61/89 (68%), Positives = 74/89 (83%)
Frame = -1
Query: 268 ARDARRVFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNT 89
A +A R+F EL ++GF PDA+TYN+LLYAFA++G+V++VE CEQ+V AGFKK+EITYNT
Sbjct: 344 AEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNT 403
Query: 88 MIHMYGKMGMLDLVVELYREMREDGCNPD 2
MIHMYGKMG LDL V LY EMR GC PD
Sbjct: 404 MIHMYGKMGRLDLAVGLYDEMRAMGCTPD 432
Score = 55.5 bits (132), Expect = 5e-06
Identities = 24/87 (27%), Positives = 48/87 (55%)
Frame = -1
Query: 262 DARRVFDELGQRGFSPDAVTYNALLYAFARDGDVEEVERVCEQMVNAGFKKDEITYNTMI 83
+A +V +++ G P + ++AL+ A+A+ G + E + M+ +G K D + Y M+
Sbjct: 451 EAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVML 510
Query: 82 HMYGKMGMLDLVVELYREMREDGCNPD 2
++ + G + ++ LYR+M D PD
Sbjct: 511 DVFARSGDTEKMLCLYRKMMNDNYRPD 537