BLASTX nr result

ID: Dioscorea21_contig00034563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034563
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322530.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_004134795.1| PREDICTED: rho GDP-dissociation inhibitor 1-...    81   8e-14
ref|XP_004144533.1| PREDICTED: rho GDP-dissociation inhibitor 1-...    80   1e-13
gb|AFW82040.1| rho GDP-dissociation inhibitor 1 [Zea mays]             79   3e-13
ref|XP_003564901.1| PREDICTED: rho GDP-dissociation inhibitor 1-...    79   3e-13

>ref|XP_002322530.1| predicted protein [Populus trichocarpa] gi|222867160|gb|EEF04291.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
 Frame = -2

Query: 351 SSFPSLSMETLEKPAPGETSVAPPPPQHHEGEDADDAEK--LSRKFSTTSLCSTXXXXXX 178
           S+  S+  +   K    ET+     P + E  + D+ +   +SRK S +SL  T      
Sbjct: 9   SNTKSMGFDEKNKEEVSETAATTKTPPNEEENNVDEPKSGGISRKMSESSLYGTDQEEED 68

Query: 177 XXXXXXXXDKNLQVPLGPQVPLKEQLEMDKDDESLRRWKEQLLGSVDLSDVGDVAEPEV 1
                       ++ LGPQ  LKEQLE DKDDESLRRWKEQLLG+VD+   G+  EPEV
Sbjct: 69  DEET-----NERKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGAVDIEAAGETLEPEV 122


>ref|XP_004134795.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus]
           gi|449516309|ref|XP_004165189.1| PREDICTED: rho
           GDP-dissociation inhibitor 1-like [Cucumis sativus]
          Length = 233

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/88 (51%), Positives = 54/88 (61%)
 Frame = -2

Query: 264 EGEDADDAEKLSRKFSTTSLCSTXXXXXXXXXXXXXXDKNLQVPLGPQVPLKEQLEMDKD 85
           E E  D++  LS K S TS+C+                +  ++ LGPQ  LK QLE DKD
Sbjct: 22  EEEKGDESVGLSIKMSETSICAAEDDEDE---------EGRKIELGPQCTLKAQLEKDKD 72

Query: 84  DESLRRWKEQLLGSVDLSDVGDVAEPEV 1
           DESLRRWKEQLLGSVD+S VG+  EPEV
Sbjct: 73  DESLRRWKEQLLGSVDISAVGETLEPEV 100


>ref|XP_004144533.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus]
           gi|449515967|ref|XP_004165019.1| PREDICTED: rho
           GDP-dissociation inhibitor 1-like [Cucumis sativus]
          Length = 240

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/89 (48%), Positives = 55/89 (61%)
 Frame = -2

Query: 267 HEGEDADDAEKLSRKFSTTSLCSTXXXXXXXXXXXXXXDKNLQVPLGPQVPLKEQLEMDK 88
           + G + +  EK+SR+ S TSL +T               +   + LGPQ  LKE+LE DK
Sbjct: 28  NHGNENEATEKISRQMSETSLSATEDETDD---------EGSNIELGPQRTLKEELEKDK 78

Query: 87  DDESLRRWKEQLLGSVDLSDVGDVAEPEV 1
           DDESLRRWKEQLLG+VDL + G+  EPEV
Sbjct: 79  DDESLRRWKEQLLGAVDLENAGETLEPEV 107


>gb|AFW82040.1| rho GDP-dissociation inhibitor 1 [Zea mays]
          Length = 212

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/46 (80%), Positives = 40/46 (86%)
 Frame = -2

Query: 138 VPLGPQVPLKEQLEMDKDDESLRRWKEQLLGSVDLSDVGDVAEPEV 1
           V LGPQVPLKEQLE+DKDDESLRRWKEQLLG VD   +G+ AEPEV
Sbjct: 32  VVLGPQVPLKEQLELDKDDESLRRWKEQLLGQVDTEQLGETAEPEV 77


>ref|XP_003564901.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Brachypodium
           distachyon]
          Length = 208

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/46 (80%), Positives = 40/46 (86%)
 Frame = -2

Query: 138 VPLGPQVPLKEQLEMDKDDESLRRWKEQLLGSVDLSDVGDVAEPEV 1
           V LGPQVPLKEQLE+DKDDESLRRWKEQLLG VD   +G+ AEPEV
Sbjct: 29  VVLGPQVPLKEQLELDKDDESLRRWKEQLLGQVDTEQLGETAEPEV 74


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