BLASTX nr result

ID: Dioscorea21_contig00034547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034547
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]    97   7e-23
ref|XP_003555357.1| PREDICTED: uncharacterized protein LOC100813...    87   1e-21
ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782...    87   5e-21
emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]    86   2e-19
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    77   4e-19

>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score = 96.7 bits (239), Expect(2) = 7e-23
 Identities = 51/94 (54%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
 Frame = -2

Query: 417  WRQYLLGRRFTIQIDHRCLRVLMHQTIQIPEQQRWLCKLVGFDFDIEYKPGVFNGPADAL 238
            WR YLLGRRFTIQ D R L+ L+ Q I  PEQQ+W+ KLVG+D++I YKPG  N  ADAL
Sbjct: 781  WRPYLLGRRFTIQTDQRSLKYLLEQRIITPEQQKWMSKLVGYDYEIVYKPGKTNQAADAL 840

Query: 237  SRVERISC-NALFAETRPQPTLWDSIRTGYRSQP 139
            SR     C N  F    PQ  +WD IR    S P
Sbjct: 841  SRNMTSPCLNVFFV---PQVQVWDEIRHEANSNP 871



 Score = 35.4 bits (80), Expect(2) = 7e-23
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 104 YSVRDGILFFKNKVWVPANSALIPLLLAEFHLTP 3
           Y  R+G++ + N++ VP  S LI  LL EFH TP
Sbjct: 888 YQWRNGLVCYNNRIVVPPGSPLIHCLLREFHDTP 921


>ref|XP_003555357.1| PREDICTED: uncharacterized protein LOC100813803 [Glycine max]
          Length = 2140

 Score = 86.7 bits (213), Expect(2) = 1e-21
 Identities = 43/93 (46%), Positives = 56/93 (60%)
 Frame = -2

Query: 417  WRQYLLGRRFTIQIDHRCLRVLMHQTIQIPEQQRWLCKLVGFDFDIEYKPGVFNGPADAL 238
            WRQYLLG RF I  DHR +R L+ QTIQ PEQQ +L KL+GFD+DI+YK G  N  AD+L
Sbjct: 773  WRQYLLGHRFIIYTDHRSIRELISQTIQTPEQQFYLTKLLGFDYDIQYKAGNSNVVADSL 832

Query: 237  SRVERISCNALFAETRPQPTLWDSIRTGYRSQP 139
            SR+   +       + P P     ++    + P
Sbjct: 833  SRISNSAQGQCLILSVPHPEFLQQLKQSLLANP 865



 Score = 41.2 bits (95), Expect(2) = 1e-21
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = -3

Query: 146  HNRAVLKNLGNHPNYSVRDGILFFKNKVWVPANSALIPLLLAEFHLTP 3
            H  A+     +HP++S+    + FK  +W+   +  IP LL E+H +P
Sbjct: 870  HREAIQATPTDHPDFSISGDFVLFKGAIWINEQNPFIPALLHEYHASP 917


>ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
          Length = 1863

 Score = 87.4 bits (215), Expect(2) = 5e-21
 Identities = 41/66 (62%), Positives = 50/66 (75%)
 Frame = -2

Query: 417  WRQYLLGRRFTIQIDHRCLRVLMHQTIQIPEQQRWLCKLVGFDFDIEYKPGVFNGPADAL 238
            WRQYLLG RFTI  DHR L+ LM Q +Q PEQQ +L KL+GFD+DI+YK G  N  AD+L
Sbjct: 858  WRQYLLGHRFTIFTDHRSLQELMSQVVQTPEQQFYLAKLLGFDYDIQYKAGSSNVVADSL 917

Query: 237  SRVERI 220
            SR+E +
Sbjct: 918  SRIENL 923



 Score = 38.5 bits (88), Expect(2) = 5e-21
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = -3

Query: 137  AVLKNLGNHPNYSVRDGILFFKNKVWVPANSALIPLLLAEFHLTP 3
            A+  +   H ++++ + ++FFK  +W+   +  IP LL E+H TP
Sbjct: 958  AIHSHPDQHRDFTLSNDLIFFKGAIWINPQNPFIPSLLHEYHATP 1002


>emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]
          Length = 623

 Score = 86.3 bits (212), Expect(2) = 2e-19
 Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = -2

Query: 417 WRQYLLGRRFTIQIDHRCLRVLMHQTIQIPEQQRWLCKLVGFDFDIEYKPGVFNGPADAL 238
           WR YLLG++F IQ D R L+ L+ Q +  PEQQ+W+ KL+G+D++I YKP   N  ADAL
Sbjct: 61  WRPYLLGQKFYIQTDQRSLKYLLEQRVVTPEQQKWVAKLLGYDYEILYKPSCENSTADAL 120

Query: 237 SRVE-RISCNALFAETRPQPTLWDSIRT 157
           SRV    + NALF     Q  +W+ I+T
Sbjct: 121 SRVPGSPTLNALFVS---QAKIWEEIKT 145



 Score = 34.3 bits (77), Expect(2) = 2e-19
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 104 YSVRDGILFFKNKVWVPANSALIPLLLAEFHLTP 3
           Y+ R G+ F+KN+V VP  S +   LL EFH +P
Sbjct: 168 YTNRQGLTFYKNRVVVPPQSHIPNQLLREFHDSP 201


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 77.4 bits (189), Expect(2) = 4e-19
 Identities = 35/63 (55%), Positives = 43/63 (68%)
 Frame = -2

Query: 417 WRQYLLGRRFTIQIDHRCLRVLMHQTIQIPEQQRWLCKLVGFDFDIEYKPGVFNGPADAL 238
           WR YLLGRRF +  D + L+ L+ Q +   EQQ W  KL+G+DF+I YKPG  N  ADAL
Sbjct: 730 WRPYLLGRRFVVSTDQKSLKQLLQQRVVTAEQQNWAAKLLGYDFEIIYKPGKLNKGADAL 789

Query: 237 SRV 229
           SRV
Sbjct: 790 SRV 792



 Score = 42.0 bits (97), Expect(2) = 4e-19
 Identities = 16/42 (38%), Positives = 28/42 (66%)
 Frame = -3

Query: 128 KNLGNHPNYSVRDGILFFKNKVWVPANSALIPLLLAEFHLTP 3
           ++  + P Y ++ G+L ++ ++ V + S +IP LLAEFH TP
Sbjct: 832 RDASSRPGYMLKQGVLLYEGRLVVSSKSVMIPTLLAEFHSTP 873


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