BLASTX nr result

ID: Dioscorea21_contig00034498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034498
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa] ...   123   2e-26
ref|XP_002519960.1| protein with unknown function [Ricinus commu...   120   9e-26
ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255...   117   7e-25
emb|CBI37413.3| unnamed protein product [Vitis vinifera]              117   7e-25
ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferas...   113   2e-23

>ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa]
           gi|222840890|gb|EEE78437.1| DNA methyltransferase
           [Populus trichocarpa]
          Length = 729

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/103 (57%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
 Frame = -3

Query: 306 KRLCKCYVVG-IGNQRKPNLRASHVKKSNPHAQDDSSMASEEFEVSRLVDICYGDPTNVG 130
           ++LCK Y V  +G   K    AS + K N ++ +D  +AS E+EV+RLVDICYG     G
Sbjct: 239 QKLCKRYAVNDVGRTHKSRSMASSMSKQNKNSSNDDDIASGEYEVARLVDICYGKTDKRG 298

Query: 129 KRGLKFKVRWKGFGASEDTWEPIEGLSNCKDSIRDFVIEGIKA 1
           KRGLKFKV WKG+  SED+WEPIEGLSNC+ SIRDFV EG K+
Sbjct: 299 KRGLKFKVHWKGYSTSEDSWEPIEGLSNCEHSIRDFVREGFKS 341


>ref|XP_002519960.1| protein with unknown function [Ricinus communis]
           gi|223541006|gb|EEF42564.1| protein with unknown
           function [Ricinus communis]
          Length = 734

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/103 (53%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
 Frame = -3

Query: 306 KRLCKCYVV-GIGNQRKPNLRASHVKKSNPHAQDDSSMASEEFEVSRLVDICYGDPTNVG 130
           ++LCK Y V  I + ++    AS V + N ++  D+ +   E+EVS+LVD+CYGDP N+G
Sbjct: 230 EKLCKRYAVKDIKSMQQSRSIASRVAEENDNSLSDNDITPGEYEVSKLVDLCYGDPDNIG 289

Query: 129 KRGLKFKVRWKGFGASEDTWEPIEGLSNCKDSIRDFVIEGIKA 1
           KRGLKFKV WKG+  SEDTWEP+EGL NC++ IRDFV +G K+
Sbjct: 290 KRGLKFKVHWKGYSTSEDTWEPVEGLRNCQECIRDFVRKGFKS 332


>ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255190 [Vitis vinifera]
          Length = 1789

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/102 (54%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
 Frame = -3

Query: 300  LCKCYVVGIGNQRKPNLRASHVK--KSNPHAQDDSSMASEEFEVSRLVDICYGDPTNVGK 127
            LC+ Y + +  +RK   R++ ++  KSN ++  D  +A++E E+ +LVDICYGDP+  GK
Sbjct: 1298 LCEQYALNLV-ERKSQSRSNVLRTSKSNINSPHDIKVATDELEILKLVDICYGDPSETGK 1356

Query: 126  RGLKFKVRWKGFGASEDTWEPIEGLSNCKDSIRDFVIEGIKA 1
            RGLKFKVRWKG+G SEDTWEPIEGLSNC++ I DFV  G+K+
Sbjct: 1357 RGLKFKVRWKGYGPSEDTWEPIEGLSNCQEGIYDFVRNGLKS 1398


>emb|CBI37413.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/102 (54%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
 Frame = -3

Query: 300 LCKCYVVGIGNQRKPNLRASHVK--KSNPHAQDDSSMASEEFEVSRLVDICYGDPTNVGK 127
           LC+ Y + +  +RK   R++ ++  KSN ++  D  +A++E E+ +LVDICYGDP+  GK
Sbjct: 238 LCEQYALNLV-ERKSQSRSNVLRTSKSNINSPHDIKVATDELEILKLVDICYGDPSETGK 296

Query: 126 RGLKFKVRWKGFGASEDTWEPIEGLSNCKDSIRDFVIEGIKA 1
           RGLKFKVRWKG+G SEDTWEPIEGLSNC++ I DFV  G+K+
Sbjct: 297 RGLKFKVRWKGYGPSEDTWEPIEGLSNCQEGIYDFVRNGLKS 338


>ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Vitis
            vinifera]
          Length = 1298

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/102 (56%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
 Frame = -3

Query: 303  RLCKCYVV-GIGNQRKPNLRASHVKKSNPHAQDDSSMASEEFEVSRLVDICYGDPTNVGK 127
            +LCK YVV  +    K N R     K N    + S   S EFEV+ L+DICYGDPTN GK
Sbjct: 798  KLCKRYVVKDVQESLKVNSRVLRAAKVNSKTGNKSP--SGEFEVASLIDICYGDPTNSGK 855

Query: 126  RGLKFKVRWKGFGASEDTWEPIEGLSNCKDSIRDFVIEGIKA 1
             GLKF+ RW G G SEDTWEPIEGLS C+D I+DFV++G KA
Sbjct: 856  HGLKFQARWAGHGPSEDTWEPIEGLSKCQDLIQDFVLKGFKA 897


Top