BLASTX nr result

ID: Dioscorea21_contig00034496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034496
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139417.1| PREDICTED: uncharacterized protein LOC101207...    59   6e-12
ref|XP_004159416.1| PREDICTED: nuclear pore complex protein Nup2...    59   6e-12
ref|XP_002966345.1| hypothetical protein SELMODRAFT_439663 [Sela...    54   1e-09
ref|XP_002978215.1| hypothetical protein SELMODRAFT_443756 [Sela...    54   1e-09
ref|XP_003571089.1| PREDICTED: nuclear pore complex protein Nup2...    60   1e-07

>ref|XP_004139417.1| PREDICTED: uncharacterized protein LOC101207579 [Cucumis sativus]
          Length = 1920

 Score = 58.9 bits (141), Expect(2) = 6e-12
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = -3

Query: 108 NQVYDMRFEVNEVEVRKGRYPSTLSFLNLLNALIAE 1
           +QVYDM+FE+NE+E R+ RYPST+SFLNLLNALI +
Sbjct: 648 SQVYDMQFELNEIEARQERYPSTISFLNLLNALIGK 683



 Score = 36.2 bits (82), Expect(2) = 6e-12
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = -2

Query: 229 EPLFKLLGYGNVPPYLK--LSAGESTFFGIELEQK 131
           EPLFKLL Y NVPPYLK  L    ++F  +  E K
Sbjct: 585 EPLFKLLSYENVPPYLKGALRNAIASFIEVSSESK 619


>ref|XP_004159416.1| PREDICTED: nuclear pore complex protein Nup205-like [Cucumis
           sativus]
          Length = 1849

 Score = 58.9 bits (141), Expect(2) = 6e-12
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = -3

Query: 108 NQVYDMRFEVNEVEVRKGRYPSTLSFLNLLNALIAE 1
           +QVYDM+FE+NE+E R+ RYPST+SFLNLLNALI +
Sbjct: 648 SQVYDMQFELNEIEARQERYPSTISFLNLLNALIGK 683



 Score = 36.2 bits (82), Expect(2) = 6e-12
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = -2

Query: 229 EPLFKLLGYGNVPPYLK--LSAGESTFFGIELEQK 131
           EPLFKLL Y NVPPYLK  L    ++F  +  E K
Sbjct: 585 EPLFKLLSYENVPPYLKGALRNAIASFIEVSSESK 619


>ref|XP_002966345.1| hypothetical protein SELMODRAFT_439663 [Selaginella moellendorffii]
           gi|300165765|gb|EFJ32372.1| hypothetical protein
           SELMODRAFT_439663 [Selaginella moellendorffii]
          Length = 1862

 Score = 53.5 bits (127), Expect(2) = 1e-09
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = -3

Query: 105 QVYDMRFEVNEVEVRKGRYPSTLSFLNLLNALIA 4
           QVYDM FE+NEVE R+  YPST+S+LNLLN L+A
Sbjct: 646 QVYDMTFELNEVEARQEEYPSTISYLNLLNVLMA 679



 Score = 33.9 bits (76), Expect(2) = 1e-09
 Identities = 18/35 (51%), Positives = 21/35 (60%)
 Frame = -2

Query: 229 EPLFKLLGYGNVPPYLKLSAGESTFFGIELEQKIR 125
           EPLFKLL + NVPPYLK S   +    + L   IR
Sbjct: 585 EPLFKLLPFENVPPYLKGSLRNAISAFVPLSPVIR 619


>ref|XP_002978215.1| hypothetical protein SELMODRAFT_443756 [Selaginella moellendorffii]
           gi|300154236|gb|EFJ20872.1| hypothetical protein
           SELMODRAFT_443756 [Selaginella moellendorffii]
          Length = 1797

 Score = 53.5 bits (127), Expect(2) = 1e-09
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = -3

Query: 105 QVYDMRFEVNEVEVRKGRYPSTLSFLNLLNALIA 4
           QVYDM FE+NEVE R+  YPST+S+LNLLN L+A
Sbjct: 605 QVYDMTFELNEVEARQEEYPSTISYLNLLNVLMA 638



 Score = 33.9 bits (76), Expect(2) = 1e-09
 Identities = 18/35 (51%), Positives = 21/35 (60%)
 Frame = -2

Query: 229 EPLFKLLGYGNVPPYLKLSAGESTFFGIELEQKIR 125
           EPLFKLL + NVPPYLK S   +    + L   IR
Sbjct: 544 EPLFKLLPFENVPPYLKGSLRNAISAFVPLSPVIR 578


>ref|XP_003571089.1| PREDICTED: nuclear pore complex protein Nup205-like [Brachypodium
           distachyon]
          Length = 1824

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = -3

Query: 105 QVYDMRFEVNEVEVRKGRYPSTLSFLNLLNALIAE 1
           QVYDMRFE+NEVE R+  YPST+SFLNL+NALIAE
Sbjct: 644 QVYDMRFELNEVEARRESYPSTISFLNLVNALIAE 678


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