BLASTX nr result
ID: Dioscorea21_contig00034467
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00034467
(253 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [S... 149 2e-34
gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays] 148 5e-34
ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containi... 144 1e-32
ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi... 136 2e-30
ref|XP_002511318.1| pentatricopeptide repeat-containing protein,... 125 5e-27
>ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein
SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 149 bits (377), Expect = 2e-34
Identities = 68/84 (80%), Positives = 79/84 (94%)
Frame = +1
Query: 1 VTMVSVLSACAVLGALETGQWVHSYIRRKQMQLTVNLGTALMDFYAKCGCIENSVEVFEK 180
VTMVSVLSACAVLGALETG+WVHSYIRRK++ LT+ LGTAL+DFYAKCGCI+++VE FE
Sbjct: 322 VTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFES 381
Query: 181 MPVKNSWSWTVLIKGLASNGRGRE 252
MPVKNSW+WT LIKG+A+NGRGRE
Sbjct: 382 MPVKNSWTWTALIKGMATNGRGRE 405
Score = 63.5 bits (153), Expect = 2e-08
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = +1
Query: 1 VTMVSVLSACAVLGALETGQWVHSYIRRKQMQLTVNLGTALMDFYAKCGCIENSVEVFEK 180
+T+VSV++AC +G + G+WV Y+ K + NL TAL+D YAKCG + + +F+
Sbjct: 221 ITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDG 280
Query: 181 MPVKNSWSWTVLIKGLASNGRGRE 252
M ++ +W+ +I G + RE
Sbjct: 281 MQSRDVVAWSAMISGYTQADQCRE 304
>gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 148 bits (373), Expect = 5e-34
Identities = 67/84 (79%), Positives = 78/84 (92%)
Frame = +1
Query: 1 VTMVSVLSACAVLGALETGQWVHSYIRRKQMQLTVNLGTALMDFYAKCGCIENSVEVFEK 180
VTMVSVLSACAVLGALETG+WVHSY+RRK++ LT LGTAL+DFYAKCGCI+++VE FE
Sbjct: 323 VTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFES 382
Query: 181 MPVKNSWSWTVLIKGLASNGRGRE 252
MPVKNSW+WT LIKG+A+NGRGRE
Sbjct: 383 MPVKNSWTWTALIKGMATNGRGRE 406
Score = 61.2 bits (147), Expect = 8e-08
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = +1
Query: 1 VTMVSVLSACAVLGALETGQWVHSYIRRKQMQLTVNLGTALMDFYAKCGCIENSVEVFEK 180
VT+VSV++AC +G + G+WV ++ + + L TALMD YAKCG I + +F+
Sbjct: 222 VTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDG 281
Query: 181 MPVKNSWSWTVLIKGLASNGRGRE 252
M ++ +W+ +I G + RE
Sbjct: 282 MQSRDVVAWSAMISGYTQADQCRE 305
>ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 144 bits (362), Expect = 1e-32
Identities = 66/84 (78%), Positives = 77/84 (91%)
Frame = +1
Query: 1 VTMVSVLSACAVLGALETGQWVHSYIRRKQMQLTVNLGTALMDFYAKCGCIENSVEVFEK 180
VTMVSVLSACAVLGALETG+WVHSYIRRK + LTV LGTAL+DFYAKCGCI+++V+ FE
Sbjct: 374 VTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFES 433
Query: 181 MPVKNSWSWTVLIKGLASNGRGRE 252
MPV+N+W+WT LIKG+ASNGR RE
Sbjct: 434 MPVRNTWTWTALIKGMASNGRSRE 457
Score = 70.9 bits (172), Expect = 1e-10
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +1
Query: 1 VTMVSVLSACAVLGALETGQWVHSYIRRKQMQLTVNLGTALMDFYAKCGCIENSVEVFEK 180
VT++SV +AC LG GQW+ Y K M + NL TAL+D YAKCG ++ + +F++
Sbjct: 273 VTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDR 332
Query: 181 MPVKNSWSWTVLIKGLASNGRGRE 252
M ++ +W+ +I G + R RE
Sbjct: 333 MHSRDVVAWSAMISGYTQSDRCRE 356
>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 136 bits (342), Expect = 2e-30
Identities = 62/84 (73%), Positives = 78/84 (92%)
Frame = +1
Query: 1 VTMVSVLSACAVLGALETGQWVHSYIRRKQMQLTVNLGTALMDFYAKCGCIENSVEVFEK 180
+TMVS+LS+CAVLGALETG+WVH +I++K+M+LTV LGTALMDFYAKCG +E+S+EVF K
Sbjct: 327 ITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGK 386
Query: 181 MPVKNSWSWTVLIKGLASNGRGRE 252
MPVKN SWTVLI+GLASNG+G++
Sbjct: 387 MPVKNVLSWTVLIQGLASNGQGKK 410
Score = 70.9 bits (172), Expect = 1e-10
Identities = 32/84 (38%), Positives = 54/84 (64%)
Frame = +1
Query: 1 VTMVSVLSACAVLGALETGQWVHSYIRRKQMQLTVNLGTALMDFYAKCGCIENSVEVFEK 180
VT+VSVL+AC L LE G+W++ Y+ K ++ L T+L+D YAKCG ++ + +F++
Sbjct: 226 VTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQ 285
Query: 181 MPVKNSWSWTVLIKGLASNGRGRE 252
M ++ +W+ +I G + R RE
Sbjct: 286 MDRRDVVAWSAMISGYSQASRCRE 309
>ref|XP_002511318.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550433|gb|EEF51920.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 441
Score = 125 bits (313), Expect = 5e-27
Identities = 56/83 (67%), Positives = 71/83 (85%)
Frame = +1
Query: 1 VTMVSVLSACAVLGALETGQWVHSYIRRKQMQLTVNLGTALMDFYAKCGCIENSVEVFEK 180
VTMVSVLS CA LGAL TG+W+H YI+RK M LTV LGTAL+DFY KCG +++++EVF+
Sbjct: 329 VTMVSVLSCCAALGALGTGKWIHLYIKRKGMNLTVTLGTALVDFYGKCGLVDSAIEVFQL 388
Query: 181 MPVKNSWSWTVLIKGLASNGRGR 249
MPVKN +SWT LI+GLA+NG+G+
Sbjct: 389 MPVKNVYSWTALIQGLANNGQGK 411
Score = 69.7 bits (169), Expect = 2e-10
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 1 VTMVSVLSACAVLGALETGQWVHSYIRRKQMQLTVNLGTALMDFYAKCGCIENSVEVFEK 180
+T++SVL+AC L +E G+W+ Y+R + +NL TAL+D YAKCG ++ + +F++
Sbjct: 228 ITLISVLAACGRLADVELGEWIAKYVRVNGLDRNMNLVTALVDMYAKCGEVDKARRLFDQ 287
Query: 181 MPVKNSWSWTVLIKGLASNGRGRE 252
M ++ +W+ +I G + R +E
Sbjct: 288 MDGRDVVAWSAMISGYSQARRCQE 311