BLASTX nr result

ID: Dioscorea21_contig00034454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034454
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274573.1| PREDICTED: translocase of chloroplast 34, ch...   159   2e-37
emb|CAN63847.1| hypothetical protein VITISV_028305 [Vitis vinifera]   159   2e-37
sp|Q41009.1|TOC34_PEA RecName: Full=Translocase of chloroplast 3...   155   2e-36
pdb|3BB1|A Chain A, Crystal Structure Of Toc34 From Pisum Sativu...   155   2e-36
pdb|1H65|A Chain A, Crystal Structure Of Pea Toc34-A Novel Gtpas...   153   2e-35

>ref|XP_002274573.1| PREDICTED: translocase of chloroplast 34, chloroplastic [Vitis
           vinifera] gi|296083376|emb|CBI23265.3| unnamed protein
           product [Vitis vinifera]
          Length = 310

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/110 (70%), Positives = 89/110 (80%)
 Frame = +2

Query: 35  QEEGSTPLMFSRSRGGFTLNVIDTPGLVSGGQVNKQTLSSIRSFLLNKTIDVLIYVCRLD 214
           Q EG  P+M SRSR GFTLN+IDTPGLV GG VN Q L  I+ FLLNKTIDVL+YV RLD
Sbjct: 69  QSEGPRPVMVSRSRAGFTLNIIDTPGLVEGGYVNDQALEIIKRFLLNKTIDVLLYVDRLD 128

Query: 215 AYRVGNLDRDVAKAITDNFGKEIWRRCLVALTHAQFTPPSGLDYIEYFAE 364
           AYRV NLDR V KAITD+FGKEIWRR +V LTHAQ +PP GL+Y ++F++
Sbjct: 129 AYRVDNLDRQVVKAITDSFGKEIWRRGVVVLTHAQLSPPDGLNYEDFFSK 178


>emb|CAN63847.1| hypothetical protein VITISV_028305 [Vitis vinifera]
          Length = 310

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/110 (70%), Positives = 89/110 (80%)
 Frame = +2

Query: 35  QEEGSTPLMFSRSRGGFTLNVIDTPGLVSGGQVNKQTLSSIRSFLLNKTIDVLIYVCRLD 214
           Q EG  P+M SRSR GFTLN+IDTPGLV GG VN Q L  I+ FLLNKTIDVL+YV RLD
Sbjct: 69  QSEGPRPVMVSRSRAGFTLNIIDTPGLVEGGYVNDQALEIIKRFLLNKTIDVLLYVDRLD 128

Query: 215 AYRVGNLDRDVAKAITDNFGKEIWRRCLVALTHAQFTPPSGLDYIEYFAE 364
           AYRV NLDR V KAITD+FGKEIWRR +V LTHAQ +PP GL+Y ++F++
Sbjct: 129 AYRVDNLDRQVVKAITDSFGKEIWRRGVVVLTHAQLSPPDGLNYEDFFSK 178


>sp|Q41009.1|TOC34_PEA RecName: Full=Translocase of chloroplast 34; AltName: Full=34 kDa
           chloroplast outer envelope protein; AltName:
           Full=GTP-binding protein IAP34; AltName:
           Full=GTP-binding protein OEP34 gi|510190|emb|CAA82196.1|
           chloroplast outer envelope protein 34 [Pisum sativum]
           gi|3293201|gb|AAC25785.1| GTP-binding protein [Pisum
           sativum]
          Length = 310

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/110 (67%), Positives = 90/110 (81%)
 Frame = +2

Query: 35  QEEGSTPLMFSRSRGGFTLNVIDTPGLVSGGQVNKQTLSSIRSFLLNKTIDVLIYVCRLD 214
           Q EG  P+M SRSR GFTLN+IDTPGL+ GG +N   L+ I+SFLL+KTIDVL+YV RLD
Sbjct: 71  QSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLD 130

Query: 215 AYRVGNLDRDVAKAITDNFGKEIWRRCLVALTHAQFTPPSGLDYIEYFAE 364
           AYRV NLD+ VAKAITD+FGK IW + +VALTHAQF+PP GL Y E+F++
Sbjct: 131 AYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSK 180


>pdb|3BB1|A Chain A, Crystal Structure Of Toc34 From Pisum Sativum In Complex
           With Mg2+ And Gmppnp gi|171848984|pdb|3BB1|B Chain B,
           Crystal Structure Of Toc34 From Pisum Sativum In Complex
           With Mg2+ And Gmppnp gi|171848985|pdb|3BB1|C Chain C,
           Crystal Structure Of Toc34 From Pisum Sativum In Complex
           With Mg2+ And Gmppnp gi|171848986|pdb|3BB1|D Chain D,
           Crystal Structure Of Toc34 From Pisum Sativum In Complex
           With Mg2+ And Gmppnp gi|171848987|pdb|3BB1|E Chain E,
           Crystal Structure Of Toc34 From Pisum Sativum In Complex
           With Mg2+ And Gmppnp gi|171848988|pdb|3BB1|F Chain F,
           Crystal Structure Of Toc34 From Pisum Sativum In Complex
           With Mg2+ And Gmppnp gi|171848989|pdb|3BB1|G Chain G,
           Crystal Structure Of Toc34 From Pisum Sativum In Complex
           With Mg2+ And Gmppnp gi|171848990|pdb|3BB1|H Chain H,
           Crystal Structure Of Toc34 From Pisum Sativum In Complex
           With Mg2+ And Gmppnp
          Length = 274

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/110 (67%), Positives = 90/110 (81%)
 Frame = +2

Query: 35  QEEGSTPLMFSRSRGGFTLNVIDTPGLVSGGQVNKQTLSSIRSFLLNKTIDVLIYVCRLD 214
           Q EG  P+M SRSR GFTLN+IDTPGL+ GG +N   L+ I+SFLL+KTIDVL+YV RLD
Sbjct: 71  QSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLD 130

Query: 215 AYRVGNLDRDVAKAITDNFGKEIWRRCLVALTHAQFTPPSGLDYIEYFAE 364
           AYRV NLD+ VAKAITD+FGK IW + +VALTHAQF+PP GL Y E+F++
Sbjct: 131 AYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSK 180


>pdb|1H65|A Chain A, Crystal Structure Of Pea Toc34-A Novel Gtpase Of The
           Chloroplast Protein Translocon gi|18655564|pdb|1H65|B
           Chain B, Crystal Structure Of Pea Toc34-A Novel Gtpase
           Of The Chloroplast Protein Translocon
           gi|18655565|pdb|1H65|C Chain C, Crystal Structure Of Pea
           Toc34-A Novel Gtpase Of The Chloroplast Protein
           Translocon
          Length = 270

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/110 (66%), Positives = 89/110 (80%)
 Frame = +2

Query: 35  QEEGSTPLMFSRSRGGFTLNVIDTPGLVSGGQVNKQTLSSIRSFLLNKTIDVLIYVCRLD 214
           Q EG  P+  SRSR GFTLN+IDTPGL+ GG +N   L+ I+SFLL+KTIDVL+YV RLD
Sbjct: 71  QSEGPRPVXVSRSRAGFTLNIIDTPGLIEGGYINDXALNIIKSFLLDKTIDVLLYVDRLD 130

Query: 215 AYRVGNLDRDVAKAITDNFGKEIWRRCLVALTHAQFTPPSGLDYIEYFAE 364
           AYRV NLD+ VAKAITD+FGK IW + +VALTHAQF+PP GL Y E+F++
Sbjct: 131 AYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSK 180


Top