BLASTX nr result

ID: Dioscorea21_contig00034450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034450
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE60318.1| hypothetical protein OsJ_13399 [Oryza sativa Japo...   320   3e-85
gb|EEC76555.1| hypothetical protein OsI_14360 [Oryza sativa Indi...   320   3e-85
gb|ABF99938.1| pentatricopeptide, putative, expressed [Oryza sat...   320   3e-85
ref|XP_003560906.1| PREDICTED: putative pentatricopeptide repeat...   305   7e-81
ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat...   296   3e-78

>gb|EEE60318.1| hypothetical protein OsJ_13399 [Oryza sativa Japonica Group]
          Length = 436

 Score =  320 bits (819), Expect = 3e-85
 Identities = 155/230 (67%), Positives = 187/230 (81%)
 Frame = +1

Query: 1   LSSIKEIHGFTFRNNIHKHVQVGSGIVEAYGRCGCLVNARHVFDLMPQRDVVVWSSMVSS 180
           LSSIKE+HGF  R+ +     +GS ++EAYGRCG L  AR+VFD + +RDVVVWSS+VS+
Sbjct: 202 LSSIKEVHGFATRHGMFASCHLGSSLIEAYGRCGSLAGARNVFDQVQERDVVVWSSIVSA 261

Query: 181 YAFHGQADIAMLTVKQMESDNVRPDWIMLLGVLKACSHAGLTDDALHFFDLMTKHYGIQA 360
           YAFHG AD+AM   + ME DNVRPD IM LGVLKAC HAG  DDAL +FD++TK +G++A
Sbjct: 262 YAFHGHADVAMSLFRHMELDNVRPDGIMFLGVLKACGHAGHADDALKYFDVLTKIFGVEA 321

Query: 361 CSEHYSCLVDVLSRAGRLRDAYDVIQGMPMKPTPKAWGALLAACRNYGEVELAEIASQAL 540
           C +HYSCLVDVL RAGRLR AYDVIQ MP+K T KAWGALLAACR YGEV LAE+A +AL
Sbjct: 322 CGDHYSCLVDVLGRAGRLRQAYDVIQTMPVKVTAKAWGALLAACRKYGEVGLAEVAGRAL 381

Query: 541 FEIEPENSGNFLLLANSYAGAGRYEEAEKVRREMIERGVNRRGPGSSWVI 690
           FEIEPEN+GNF+ LAN Y+G G +++AE+VRREM +RGV RR PGSSW+I
Sbjct: 382 FEIEPENAGNFVSLANIYSGMGMHDKAEQVRREMEQRGV-RRLPGSSWMI 430


>gb|EEC76555.1| hypothetical protein OsI_14360 [Oryza sativa Indica Group]
          Length = 436

 Score =  320 bits (819), Expect = 3e-85
 Identities = 155/230 (67%), Positives = 187/230 (81%)
 Frame = +1

Query: 1   LSSIKEIHGFTFRNNIHKHVQVGSGIVEAYGRCGCLVNARHVFDLMPQRDVVVWSSMVSS 180
           LSSIKE+HGF  R+ +     +GS ++EAYGRCG L  AR+VFD + +RDVVVWSS+VS+
Sbjct: 202 LSSIKEVHGFATRHGMFASCHLGSSLIEAYGRCGSLAGARNVFDQVQERDVVVWSSIVSA 261

Query: 181 YAFHGQADIAMLTVKQMESDNVRPDWIMLLGVLKACSHAGLTDDALHFFDLMTKHYGIQA 360
           YAFHG AD+AM   + ME DNVRPD IM LGVLKAC HAG  DDAL +FD++TK +G++A
Sbjct: 262 YAFHGHADVAMSLFRHMELDNVRPDGIMFLGVLKACGHAGHADDALKYFDVLTKIFGVEA 321

Query: 361 CSEHYSCLVDVLSRAGRLRDAYDVIQGMPMKPTPKAWGALLAACRNYGEVELAEIASQAL 540
           C +HYSCLVDVL RAGRLR AYDVIQ MP+K T KAWGALLAACR YGEV LAE+A +AL
Sbjct: 322 CGDHYSCLVDVLGRAGRLRQAYDVIQTMPVKVTAKAWGALLAACRKYGEVGLAEVAGRAL 381

Query: 541 FEIEPENSGNFLLLANSYAGAGRYEEAEKVRREMIERGVNRRGPGSSWVI 690
           FEIEPEN+GNF+ LAN Y+G G +++AE+VRREM +RGV RR PGSSW+I
Sbjct: 382 FEIEPENAGNFVSLANIYSGMGMHDKAEQVRREMEQRGV-RRLPGSSWMI 430


>gb|ABF99938.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group] gi|215704803|dbj|BAG94831.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 438

 Score =  320 bits (819), Expect = 3e-85
 Identities = 155/230 (67%), Positives = 187/230 (81%)
 Frame = +1

Query: 1   LSSIKEIHGFTFRNNIHKHVQVGSGIVEAYGRCGCLVNARHVFDLMPQRDVVVWSSMVSS 180
           LSSIKE+HGF  R+ +     +GS ++EAYGRCG L  AR+VFD + +RDVVVWSS+VS+
Sbjct: 202 LSSIKEVHGFATRHGMFASCHLGSSLIEAYGRCGSLAGARNVFDQVQERDVVVWSSIVSA 261

Query: 181 YAFHGQADIAMLTVKQMESDNVRPDWIMLLGVLKACSHAGLTDDALHFFDLMTKHYGIQA 360
           YAFHG AD+AM   + ME DNVRPD IM LGVLKAC HAG  DDAL +FD++TK +G++A
Sbjct: 262 YAFHGHADVAMSLFRHMELDNVRPDGIMFLGVLKACGHAGHADDALKYFDVLTKIFGVEA 321

Query: 361 CSEHYSCLVDVLSRAGRLRDAYDVIQGMPMKPTPKAWGALLAACRNYGEVELAEIASQAL 540
           C +HYSCLVDVL RAGRLR AYDVIQ MP+K T KAWGALLAACR YGEV LAE+A +AL
Sbjct: 322 CGDHYSCLVDVLGRAGRLRQAYDVIQTMPVKVTAKAWGALLAACRKYGEVGLAEVAGRAL 381

Query: 541 FEIEPENSGNFLLLANSYAGAGRYEEAEKVRREMIERGVNRRGPGSSWVI 690
           FEIEPEN+GNF+ LAN Y+G G +++AE+VRREM +RGV RR PGSSW+I
Sbjct: 382 FEIEPENAGNFVSLANIYSGMGMHDKAEQVRREMEQRGV-RRLPGSSWMI 430


>ref|XP_003560906.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510-like [Brachypodium distachyon]
          Length = 438

 Score =  305 bits (781), Expect = 7e-81
 Identities = 146/230 (63%), Positives = 182/230 (79%)
 Frame = +1

Query: 1   LSSIKEIHGFTFRNNIHKHVQVGSGIVEAYGRCGCLVNARHVFDLMPQRDVVVWSSMVSS 180
           L+S++E+HGF  R+ +     +GS ++EAYGRCG LV AR VFD + +RDVVVWSS+VS+
Sbjct: 202 LNSVREVHGFAVRHGMSASCHLGSSLIEAYGRCGSLVAARRVFDKVDERDVVVWSSIVSA 261

Query: 181 YAFHGQADIAMLTVKQMESDNVRPDWIMLLGVLKACSHAGLTDDALHFFDLMTKHYGIQA 360
           YAFHG  D+AM   + ME DNVRPD IM LGVLKAC HAG  DDAL +FD+ T+ YG++A
Sbjct: 262 YAFHGLGDVAMSLFRWMELDNVRPDGIMFLGVLKACGHAGHADDALKYFDVFTETYGVEA 321

Query: 361 CSEHYSCLVDVLSRAGRLRDAYDVIQGMPMKPTPKAWGALLAACRNYGEVELAEIASQAL 540
           C +HYSCLVDVL RAGRL  AY+VIQ MP++ T KAWGALLAACR YGEV LAE+A++AL
Sbjct: 322 CGDHYSCLVDVLGRAGRLHQAYNVIQTMPVRVTAKAWGALLAACRKYGEVGLAEVAARAL 381

Query: 541 FEIEPENSGNFLLLANSYAGAGRYEEAEKVRREMIERGVNRRGPGSSWVI 690
           FE+EP N+G F+ LAN Y+G G + EAE+VRR+M ERGV +R PGSSW+I
Sbjct: 382 FELEPGNAGTFVSLANIYSGVGMHAEAERVRRDMEERGV-QRSPGSSWMI 430


>ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510-like [Cucumis sativus]
          Length = 391

 Score =  296 bits (758), Expect = 3e-78
 Identities = 144/232 (62%), Positives = 183/232 (78%)
 Frame = +1

Query: 1   LSSIKEIHGFTFRNNIHKHVQVGSGIVEAYGRCGCLVNARHVFDLMPQRDVVVWSSMVSS 180
           L  IK+IHGF  RN+I  H+Q+ SG+VEAYGRCGCL  A +VFD M +RDVV WSS++S+
Sbjct: 160 LDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERDVVAWSSLISA 219

Query: 181 YAFHGQADIAMLTVKQMESDNVRPDWIMLLGVLKACSHAGLTDDALHFFDLMTKHYGIQA 360
           +A HG+A  A+   +QMES  V+PD I  +GVLKACSH GL ++AL +F+ M + YG+QA
Sbjct: 220 HALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYFNRMQRDYGLQA 279

Query: 361 CSEHYSCLVDVLSRAGRLRDAYDVIQGMPMKPTPKAWGALLAACRNYGEVELAEIASQAL 540
            S+HYSCLVDVLSRAGRL +AYD+I+ MP++ T KAWGALL ACR YGE+ELAEIA +AL
Sbjct: 280 SSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKAL 339

Query: 541 FEIEPENSGNFLLLANSYAGAGRYEEAEKVRREMIERGVNRRGPGSSWVISQ 696
           FEIEPEN+ N++LLA  YA  GR+EEA+++RREM ER V +  PGSSWV+ Q
Sbjct: 340 FEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRV-KVVPGSSWVVYQ 390


Top